RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 ABCD1P33897 745 aa16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 AFMP43652 599 aa16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 AMPD3Q01432 767 aa16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 BMS1Q14692 1282 aaKnown RBP16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 L1TD1Q5T7N2 865 aaKnown RBP16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 PTCRAQ6ISU1 281 aaPredicted RBP16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 CNNM4Q6P4Q7 775 aa16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 C18orf25Q96B23 403 aaPredicted RBP16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 MSLNLQ96KJ4 702 aa16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 MSTO1Q9BUK6 570 aa16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 LRRC27Q9C0I9 530 aa16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 C5orf42Q9H799 3197 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 GRXCR2A6NFK2 248 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 TADA2AO75478 443 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 PRPF6O94906 941 aaKnown RBP16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 URODP06132 367 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 CLCNKBP51801 687 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 SPAG1Q07617 926 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 CUL4BQ13620 913 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 ENOX2Q16206 610 aaKnown RBP16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 CD300LGQ6UXG3 332 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 C3orf58Q8NDZ4 430 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 ACCSQ96QU6 501 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 GOLPH3LQ9H4A5 285 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 EPHX3Q9H6B9 360 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 STK39Q9UEW8 545 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 CD207Q9UJ71 328 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 HCFC2Q9Y5Z7 792 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 STYXL1Q9Y6J8 313 aa16.77■□□□□ 0.28
CCNDBP1-203ENST00000562553 FAM237AA0A1B0GTK4 181 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 TTC26A0AVF1 554 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 PI4K2BG5E9Z4 385 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 CNPP09543 421 aaKnown RBP16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 SLFN14P0C7P3 912 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 ADSSP30520 456 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 GLUD2P49448 558 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 NDUFA8P51970 172 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 DSG1Q02413 1049 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 UPP1Q16831 310 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 KIAA0319Q5VV43 1072 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 UNC13DQ70J99 1090 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 CEP57L1Q8IYX8 460 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 FSIP1Q8NA03 581 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 ZSWIM2Q8NEG5 633 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 KLHL5Q96PQ7 755 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 PYM1Q9BRP8 204 aaKnown RBP16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 CD320Q9NPF0 282 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 MRPL17Q9NRX2 175 aaKnown RBP16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 CHST7Q9NS84 486 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 TUBGCP4Q9UGJ1 667 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 CPSF3Q9UKF6 684 aaKnown RBP16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 PCDHB13Q9Y5F0 798 aa16.76■□□□□ 0.27
CCNDBP1-203ENST00000562553 SF3B1O75533 1304 aaKnown RBP eCLIP16.75■□□□□ 0.272e-11■■■■■ 137.9
CCNDBP1-203ENST00000562553 A0A1W2PQ27 194 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 A0A1W2PQ64 194 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 A0A1W2PQD8 194 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 FSD2A1L4K1 749 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 LACTBL1A8MY62 500 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 TMEM189-UBE2V1I3L0A0 370 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 MBTPS2O43462 519 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 B3GAT3O94766 335 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 EPCAMP16422 314 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 ACOT2P49753 483 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 EHHADHQ08426 723 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 ALCAMQ13740 583 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 USP41Q3LFD5 358 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 RTP2Q5QGT7 225 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 FAM26FQ5R3K3 315 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 SLFN12LQ6IEE8 588 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 TMEM184AQ6ZMB5 413 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 SMRP1Q8NCR6 262 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 SLC22A17Q8WUG5 538 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 POMGNT1Q8WZA1 660 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 KHSRPQ92945 711 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 PAGE5Q96GU1 130 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 UROC1Q96N76 676 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 RPF1Q9H9Y2 349 aaKnown RBP16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 PLEKHA5Q9HAU0 1116 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 SLC38A7Q9NVC3 462 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 AGO2Q9UKV8 859 aaKnown RBP16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 EXOC7Q9UPT5 735 aa16.75■□□□□ 0.27
CCNDBP1-203ENST00000562553 MTCL1Q9Y4B5 1905 aaKnown RBP16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 I3L4J1 428 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 PODXLO00592 558 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 KLRC4O43908 158 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 GPR37L1O60883 481 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 ADRB2P07550 413 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 HOXD13P35453 343 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 SYKP43405 635 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 BRCC3P46736 316 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 GUCY2FP51841 1108 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 PPP2R3AQ06190 1150 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 SMAD4Q13485 552 aaKnown RBP16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 KYAT1Q16773 422 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 FAM171A1Q5VUB5 890 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 KIAA1841Q6NSI8 718 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 ANKRD54Q6NXT1 300 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 SYCE2Q6PIF2 218 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 DCLRE1AQ6PJP8 1040 aa16.74■□□□□ 0.27
CCNDBP1-203ENST00000562553 PRSS55Q6UWB4 352 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms