RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 KIFAP3Q92845 792 aa21.33■■□□□ 1.01
CDH11-203ENST00000562325 DNASE1L2Q92874 299 aa21.33■■□□□ 1.01
CDH11-203ENST00000562325 FAM126AQ9BYI3 521 aaPredicted RBP21.33■■□□□ 1.01
CDH11-203ENST00000562325 LTB4R2Q9NPC1 389 aa21.33■■□□□ 1.01
CDH11-203ENST00000562325 SPATA6Q9NWH7 488 aaPredicted RBP21.33■■□□□ 1.01
CDH11-203ENST00000562325 DNMT3BQ9UBC3 853 aaKnown RBP21.33■■□□□ 1.01
CDH11-203ENST00000562325 MRPS17Q9Y2R5 130 aaKnown RBP21.33■■□□□ 1.01
CDH11-203ENST00000562325 MYH15Q9Y2K3 1946 aa21.33■■□□□ 1
CDH11-203ENST00000562325 ARHGEF37A1IGU5 675 aa21.32■■□□□ 1
CDH11-203ENST00000562325 ARHGEF35A5YM69 484 aa21.32■■□□□ 1
CDH11-203ENST00000562325 MED24O75448 989 aa21.32■■□□□ 1
CDH11-203ENST00000562325 MICAL2O94851 1124 aa21.32■■□□□ 1
CDH11-203ENST00000562325 UPP1Q16831 310 aa21.32■■□□□ 1
CDH11-203ENST00000562325 HAUS3Q68CZ6 603 aa21.32■■□□□ 1
CDH11-203ENST00000562325 ZBTB44Q8NCP5 570 aa21.32■■□□□ 1
CDH11-203ENST00000562325 ZNF461Q8TAF7 563 aa21.32■■□□□ 1
CDH11-203ENST00000562325 BSNDQ8WZ55 320 aa21.32■■□□□ 1
CDH11-203ENST00000562325 NELL1Q92832 810 aa21.32■■□□□ 1
CDH11-203ENST00000562325 DDX27Q96GQ7 796 aaKnown RBP21.32■■□□□ 1
CDH11-203ENST00000562325 IFT74Q96LB3 600 aa21.32■■□□□ 1
CDH11-203ENST00000562325 IER2Q9BTL4 223 aa21.32■■□□□ 1
CDH11-203ENST00000562325 TMEM60Q9H2L4 133 aa21.32■■□□□ 1
CDH11-203ENST00000562325 MRPS23Q9Y3D9 190 aaKnown RBP21.32■■□□□ 1
CDH11-203ENST00000562325 MIA3Q5JRA6 1907 aa21.31■■□□□ 1
CDH11-203ENST00000562325 FAM170BA6NMN3 283 aa21.31■■□□□ 1
CDH11-203ENST00000562325 WNT7AO00755 349 aa21.31■■□□□ 1
CDH11-203ENST00000562325 UBXN2BQ14CS0 331 aa21.31■■□□□ 1
CDH11-203ENST00000562325 SAFBQ15424 915 aaKnown RBP eCLIP21.31■■□□□ 1
CDH11-203ENST00000562325 ME3Q16798 604 aa21.31■■□□□ 1
CDH11-203ENST00000562325 XKR4Q5GH76 650 aa21.31■■□□□ 1
CDH11-203ENST00000562325 MAMSTRQ6ZN01 415 aa21.31■■□□□ 1
CDH11-203ENST00000562325 ATRIPQ8WXE1 791 aa21.31■■□□□ 1
CDH11-203ENST00000562325 SECISBP2LQ93073 1101 aaKnown RBP21.31■■□□□ 1
CDH11-203ENST00000562325 TOPORSQ9NS56 1045 aaPredicted RBP21.31■■□□□ 1
CDH11-203ENST00000562325 SLC38A7Q9NVC3 462 aa21.31■■□□□ 1
CDH11-203ENST00000562325 CDY1Q9Y6F8 540 aa21.31■■□□□ 1
CDH11-203ENST00000562325 NCOR2Q9Y618 2525 aa21.31■■□□□ 1
CDH11-203ENST00000562325 DOCK6Q96HP0 2047 aa21.31■■□□□ 1
CDH11-203ENST00000562325 VWA8A3KMH1 1905 aa21.3■■□□□ 1
CDH11-203ENST00000562325 MCM7P33993 719 aa21.3■■□□□ 1
CDH11-203ENST00000562325 ATF7IP2Q5U623 682 aa21.3■■□□□ 1
CDH11-203ENST00000562325 ZNF852Q6ZMS4 543 aa21.3■■□□□ 1
CDH11-203ENST00000562325 ELSPBP1Q96BH3 223 aa21.3■■□□□ 1
CDH11-203ENST00000562325 ZSCAN32Q9NX65 697 aa21.3■■□□□ 1
CDH11-203ENST00000562325 MAFFQ9ULX9 164 aa21.3■■□□□ 1
CDH11-203ENST00000562325 TNFSF13BQ9Y275 285 aa21.3■■□□□ 1
CDH11-203ENST00000562325 GDAQ9Y2T3 454 aa21.3■■□□□ 1
CDH11-203ENST00000562325 STK24Q9Y6E0 443 aa21.3■■□□□ 1
CDH11-203ENST00000562325 A0A087WWV3 80 aa21.29■■□□□ 1
CDH11-203ENST00000562325 SYN3O14994 580 aa21.29■■□□□ 1
CDH11-203ENST00000562325 LILRB5O75023 590 aa21.29■■□□□ 1
CDH11-203ENST00000562325 LRRN2O75325 713 aa21.29■■□□□ 1
CDH11-203ENST00000562325 ABLIM3O94929 683 aa21.29■■□□□ 1
CDH11-203ENST00000562325 RHOP08100 348 aa21.29■■□□□ 1
CDH11-203ENST00000562325 CLCNKBP51801 687 aa21.29■■□□□ 1
CDH11-203ENST00000562325 VARS2Q5ST30 1063 aaKnown RBP21.29■■□□□ 1
CDH11-203ENST00000562325 EEF1DP3Q658K8 133 aa21.29■■□□□ 1
CDH11-203ENST00000562325 CD300LGQ6UXG3 332 aa21.29■■□□□ 1
CDH11-203ENST00000562325 NECAB1Q8N987 351 aa21.29■■□□□ 1
CDH11-203ENST00000562325 KXD1Q9BQD3 176 aa21.29■■□□□ 1
CDH11-203ENST00000562325 EPC1Q9H2F5 836 aa21.29■■□□□ 1
CDH11-203ENST00000562325 HCFC1R1Q9NWW0 138 aa21.29■■□□□ 1
CDH11-203ENST00000562325 ZNF197O14709 1029 aa21.28■■□□□ 1
CDH11-203ENST00000562325 EIF5BO60841 1220 aaKnown RBP21.28■■□□□ 1
CDH11-203ENST00000562325 OR52Z1P0C646 297 aa21.28■■□□□ 1
CDH11-203ENST00000562325 PTPN2P17706 415 aa21.28■■□□□ 1
CDH11-203ENST00000562325 GRM5P41594 1212 aa21.28■■□□□ 1
CDH11-203ENST00000562325 YARSP54577 528 aaKnown RBP21.28■■□□□ 1
CDH11-203ENST00000562325 ALKAL1Q6UXT8 129 aa21.28■■□□□ 1
CDH11-203ENST00000562325 TCEAL8Q8IYN2 117 aa21.28■■□□□ 1
CDH11-203ENST00000562325 CCDC94Q9BW85 323 aaPredicted RBP21.28■■□□□ 1
CDH11-203ENST00000562325 CXCL16Q9H2A7 254 aa21.28■■□□□ 1
CDH11-203ENST00000562325 TRPV5Q9NQA5 729 aa21.28■■□□□ 1
CDH11-203ENST00000562325 PRMT8Q9NR22 394 aaPredicted RBP21.28■■□□□ 1
CDH11-203ENST00000562325 PATJQ8NI35 1801 aa21.27■■□□□ 1
CDH11-203ENST00000562325 SMIM28A0A1B0GU29 152 aa21.27■■□□□ 1
CDH11-203ENST00000562325 MED19A0JLT2 244 aaPredicted RBP21.27■■□□□ 1
CDH11-203ENST00000562325 K7ERI5 159 aa21.27■■□□□ 1
CDH11-203ENST00000562325 MAN2B1O00754 1011 aa21.27■■□□□ 1
CDH11-203ENST00000562325 TBC1D4O60343 1298 aa21.27■■□□□ 1
CDH11-203ENST00000562325 LRG1P02750 347 aa21.27■■□□□ 1
CDH11-203ENST00000562325 ATF2P15336 505 aa21.27■■□□□ 1
CDH11-203ENST00000562325 TKTP29401 623 aaKnown RBP21.27■■□□□ 1
CDH11-203ENST00000562325 ELF1P32519 619 aa21.27■■□□□ 1
CDH11-203ENST00000562325 ROR1Q01973 937 aa21.27■■□□□ 1
CDH11-203ENST00000562325 CSTF1Q05048 431 aaKnown RBP21.27■■□□□ 1
CDH11-203ENST00000562325 ADCY1Q08828 1119 aa21.27■■□□□ 1
CDH11-203ENST00000562325 NT5DC1Q5TFE4 455 aa21.27■■□□□ 1
CDH11-203ENST00000562325 TPGS2Q68CL5 300 aa21.27■■□□□ 1
CDH11-203ENST00000562325 TPRG1Q6ZUI0 275 aa21.27■■□□□ 1
CDH11-203ENST00000562325 ST13P5Q8NFI4 369 aaPredicted RBP21.27■■□□□ 1
CDH11-203ENST00000562325 FOXP1Q9H334 677 aaPredicted RBP21.27■■□□□ 1
CDH11-203ENST00000562325 NCDNQ9UBB6 729 aa21.27■■□□□ 1
CDH11-203ENST00000562325 MTF2Q9Y483 593 aaPredicted RBP21.27■■□□□ 1
CDH11-203ENST00000562325 NOTCH4Q99466 2003 aa21.27■■□□□ 1
CDH11-203ENST00000562325 PRR5-ARHGAP8B1AHC4 643 aa21.26■□□□□ 0.99
CDH11-203ENST00000562325 H7C4K7 107 aa21.26■□□□□ 0.99
CDH11-203ENST00000562325 EDN1P05305 212 aa21.26■□□□□ 0.99
CDH11-203ENST00000562325 TARSP26639 723 aaKnown RBP21.26■□□□□ 0.99
CDH11-203ENST00000562325 RPL9P32969 192 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms