RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 SREBF1P36956 1147 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 HIRAP54198 1017 aaPredicted RBP14.17□□□□□ -0.14
CLK3-206ENST00000562078 PLTPP55058 493 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 HYIQ5T013 277 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 PRAMEF18Q5VWM3 479 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 CENPPQ6IPU0 288 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 ZNF449Q6P9G9 518 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 MOXD1Q6UVY6 613 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 SLFN12Q8IYM2 578 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 LENG9Q96B70 501 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 HIC2Q96JB3 615 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 LRRC27Q9C0I9 530 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 SLITRK6Q9H5Y7 841 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 STOML1Q9UBI4 398 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 ADAMTS1Q9UHI8 967 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 USP20Q9Y2K6 914 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 SLC4A7Q9Y6M7 1214 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 MYH11P35749 1972 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 POTEFA5A3E0 1075 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 CCDC188H7C350 402 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 TPD52L2O43399 206 aaKnown RBP14.17□□□□□ -0.14
CLK3-206ENST00000562078 ASNSP08243 561 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 POTEIP0CG38 1075 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 ZBTB48P10074 688 aaPredicted RBP14.17□□□□□ -0.14
CLK3-206ENST00000562078 ZNF24P17028 368 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 COPB2P35606 906 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 MAP3K10Q02779 954 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 COASYQ13057 564 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 CBX3Q13185 183 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 AUHQ13825 339 aaKnown RBP14.17□□□□□ -0.14
CLK3-206ENST00000562078 LRRC41Q15345 812 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 SPDYCQ5MJ68 293 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 RNF43Q68DV7 783 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 CCDC174Q6PII3 467 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 POTEGQ6S5H5 508 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 POTEEQ6S8J3 1075 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 DAAM2Q86T65 1068 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 CCDC84Q86UT8 332 aaPredicted RBP14.17□□□□□ -0.14
CLK3-206ENST00000562078 DNAJC19Q96DA6 116 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 DDX27Q96GQ7 796 aaKnown RBP14.17□□□□□ -0.14
CLK3-206ENST00000562078 HAPLN3Q96S86 360 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 DCLRE1BQ9H816 532 aa14.17□□□□□ -0.14
CLK3-206ENST00000562078 MROH7Q68CQ1 1323 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 RPTORQ8N122 1335 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 NPHP3-ACAD11A0A0J9YXS1 232 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 TMEM221A6NGB7 291 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 MED24O75448 989 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 GFPT2O94808 682 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 FOSP01100 380 aaPredicted RBP14.16□□□□□ -0.14
CLK3-206ENST00000562078 FGFR4P22455 802 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 RTP1P59025 263 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 WASHC2DQ5SRD0 308 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 DCAF15Q66K64 600 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 RFWD3Q6PCD5 774 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 INTS8Q75QN2 995 aaKnown RBP14.16□□□□□ -0.14
CLK3-206ENST00000562078 GUF1Q8N442 669 aaKnown RBP14.16□□□□□ -0.14
CLK3-206ENST00000562078 SLC35B4Q969S0 331 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 SLC7A6OSQ96CW6 309 aaPredicted RBP14.16□□□□□ -0.14
CLK3-206ENST00000562078 GLIS2Q9BZE0 524 aaPredicted RBP14.16□□□□□ -0.14
CLK3-206ENST00000562078 GRIN3BO60391 1043 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 PLA2G4BP0C869 781 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 POU5F1Q01860 360 aaKnown RBP14.16□□□□□ -0.14
CLK3-206ENST00000562078 CACNB1Q02641 598 aaPredicted RBP14.16□□□□□ -0.14
CLK3-206ENST00000562078 PLOD1Q02809 727 aaPredicted RBP14.16□□□□□ -0.14
CLK3-206ENST00000562078 SPIRE1Q08AE8 756 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 RCN1Q15293 331 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 SLC18A3Q16572 532 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 MFSD4BQ5TF39 518 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 TSHZ1Q6ZSZ6 1077 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 TAOK1Q7L7X3 1001 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 ADAT2Q7Z6V5 191 aaKnown RBP14.16□□□□□ -0.14
CLK3-206ENST00000562078 GPBP1Q86WP2 473 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 SMC1BQ8NDV3 1235 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 FBXO25Q8TCJ0 367 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 TGS1Q96RS0 853 aaKnown RBP14.16□□□□□ -0.14
CLK3-206ENST00000562078 DOCK1Q14185 1865 aa14.16□□□□□ -0.14
CLK3-206ENST00000562078 RASGRF2O14827 1237 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 CBX6O95503 412 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 CFBP00751 764 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 SERPING1P05155 500 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 OCRLQ01968 901 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 CCDC15Q0P6D6 951 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 OLFML2BQ68BL8 750 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 RINLQ6ZS11 566 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 ARHGAP18Q8N392 663 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 CYP2W1Q8TAV3 490 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 GLG1Q92896 1179 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 LUC7LQ9NQ29 371 aaKnown RBP14.15□□□□□ -0.14
CLK3-206ENST00000562078 TBC1D7Q9P0N9 293 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 SNX24Q9Y343 169 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 LYNP07948 512 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 CCDC166P0CW27 439 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 T-ENOLP0DO92 83 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 GIT2Q14161 759 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 TNFAIP8L3Q5GJ75 292 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 FAM26FQ5R3K3 315 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 TCERG1LQ5VWI1 586 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 DUS1LQ6P1R4 473 aaKnown RBP14.15□□□□□ -0.14
CLK3-206ENST00000562078 VSTM1Q6UX27 236 aa14.15□□□□□ -0.14
CLK3-206ENST00000562078 KBTBD2Q8IY47 623 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms