RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 C8orf74Q6P047 294 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 LRRC57Q8N9N7 239 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 FAM81BQ96LP2 452 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 SYT11Q9BT88 431 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 KIAA1586Q9HCI6 787 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 MED4Q9NPJ6 270 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 STIM2Q9P246 746 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 SUCLA2Q9P2R7 463 aaPredicted RBP12.5□□□□□ -0.41
PCAT1-202ENST00000561978 SEPT9Q9UHD8 586 aaPredicted RBP12.5□□□□□ -0.41
PCAT1-202ENST00000561978 ANKRD62A6NC57 917 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 KBTBD13C9JR72 458 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 KIAA0391O15091 583 aaKnown RBP12.5□□□□□ -0.41
PCAT1-202ENST00000561978 ATG7O95352 703 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 GH1P01241 217 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 ASGR1P07306 291 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 TNFRSF8P28908 595 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 MATR3P43243 847 aaKnown RBP eCLIP12.5□□□□□ -0.41
PCAT1-202ENST00000561978 MFAP3P55082 362 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 TNNC1P63316 161 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 PRKCEQ02156 737 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 KCNV1Q6PIU1 500 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 PEX26Q7Z412 305 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 GLYCTKQ8IVS8 523 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 IFT20Q8IY31 132 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 KLHDC9Q8NEP7 349 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 LNX1Q8TBB1 728 aaPredicted RBP12.5□□□□□ -0.41
PCAT1-202ENST00000561978 ACTRT1Q8TDG2 376 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 AFG1LQ8WV93 481 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 RFFLQ8WZ73 363 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 KCNN1Q92952 543 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 MFSD14AQ96MC6 490 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 FBXL18Q96ME1 805 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 AGPAT1Q99943 283 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 SENP6Q9GZR1 1112 aaPredicted RBP12.5□□□□□ -0.41
PCAT1-202ENST00000561978 TMEM117Q9H0C3 514 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 UPF3AQ9H1J1 476 aaKnown RBP12.5□□□□□ -0.41
PCAT1-202ENST00000561978 TMEM8AQ9HCN3 771 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 NCANO14594 1321 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 TISP43B9A030 160 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 KCNK3O14649 394 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 ADSSP30520 456 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 TNNT3P45378 269 aaPredicted RBP12.49□□□□□ -0.41
PCAT1-202ENST00000561978 CELF3Q5SZQ8 465 aaKnown RBP12.49□□□□□ -0.41
PCAT1-202ENST00000561978 C1orf220Q5T0J3 134 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 CCSAPQ6IQ19 270 aaPredicted RBP12.49□□□□□ -0.41
PCAT1-202ENST00000561978 CXCL17Q6UXB2 119 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 CCDC60Q8IWA6 550 aaPredicted RBP12.49□□□□□ -0.41
PCAT1-202ENST00000561978 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 PARD3BQ8TEW8 1205 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 POMGNT1Q8WZA1 660 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 MS4A14Q96JA4 679 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 SPATA33Q96N06 139 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 PDE11AQ9HCR9 933 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 ZNF302Q9NR11 478 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 COQ4Q9Y3A0 265 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 Q9Y3F1 56 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 MAFBQ9Y5Q3 323 aaPredicted RBP12.49□□□□□ -0.41
PCAT1-202ENST00000561978 WDR81Q562E7 1941 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 ANKRD63C9JTQ0 380 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 POLR3GO15318 223 aaPredicted RBP12.49□□□□□ -0.41
PCAT1-202ENST00000561978 CPT1AP50416 773 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 ACLYP53396 1101 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 CLUL1Q15846 466 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 NECAB2Q7Z6G3 386 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 UBE2Q1Q7Z7E8 422 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 DAAM2Q86T65 1068 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 RHOT2Q8IXI1 618 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 GPD1LQ8N335 351 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 USP38Q8NB14 1042 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 PPP1R13LQ8WUF5 828 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 RBM12Q9NTZ6 932 aaKnown RBP12.49□□□□□ -0.41
PCAT1-202ENST00000561978 AMFRQ9UKV5 643 aa12.49□□□□□ -0.41
PCAT1-202ENST00000561978 GOLGA8IPA6NC78 632 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 A6NJR5 290 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 GOLGA8JA6NMD2 632 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 HNRNPDLO14979 420 aaKnown RBP12.48□□□□□ -0.41
PCAT1-202ENST00000561978 MMP3P08254 477 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 CST5P28325 142 aaPredicted RBP12.48□□□□□ -0.41
PCAT1-202ENST00000561978 AARSP49588 968 aaKnown RBP eCLIP12.48□□□□□ -0.41
PCAT1-202ENST00000561978 GPC3P51654 580 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 POLGP54098 1239 aaPredicted RBP12.48□□□□□ -0.41
PCAT1-202ENST00000561978 EPHB4P54760 987 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 STRN3Q13033 797 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 LAMC2Q13753 1193 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 NEDD9Q14511 834 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 TCEAL1Q15170 157 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 EMBQ6PCB8 327 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 ZNF771Q7L3S4 317 aaPredicted RBP12.48□□□□□ -0.41
PCAT1-202ENST00000561978 CBWD2Q8IUF1 395 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 PCSK9Q8NBP7 692 aaKnown RBP12.48□□□□□ -0.41
PCAT1-202ENST00000561978 SLC35G2Q8TBE7 412 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 FAM71BQ8TC56 605 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 BICD1Q96G01 975 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 C11orf49Q9H6J7 331 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 SUGCTQ9HAC7 445 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 ST7Q9NRC1 585 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 NRBP2Q9NSY0 501 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 SEPT11Q9NVA2 429 aaKnown RBP12.48□□□□□ -0.41
PCAT1-202ENST00000561978 ARHGAP28Q9P2N2 729 aa12.48□□□□□ -0.41
PCAT1-202ENST00000561978 PPME1Q9Y570 386 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms