RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 VPS11Q9H270 941 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 TMEM60Q9H2L4 133 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 FAM204AQ9H8W3 233 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 TRPS1Q9UHF7 1281 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 ZMYM3Q14202 1370 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 FAM227AF5H4B4 570 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 MFAP3LO75121 409 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 ZBED1O96006 694 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 GNAT2P19087 354 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 ACRV1P26436 265 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 SREBF1P36956 1147 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 SAFBQ15424 915 aaKnown RBP eCLIP7.94□□□□□ -1.14
SMG1-204ENST00000561940 DRC7Q8IY82 874 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 PQLC1Q8N2U9 271 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 ZGPATQ8N5A5 531 aaKnown RBP7.94□□□□□ -1.14
SMG1-204ENST00000561940 MDM1Q8TC05 714 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 CCHCR1Q8TD31 782 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 TTC17Q96AE7 1141 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 IL17RAQ96F46 866 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 PLEKHG4BQ96PX9 1271 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 RPS6KC1Q96S38 1066 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 CPPED1Q9BRF8 314 aaPredicted RBP7.94□□□□□ -1.14
SMG1-204ENST00000561940 GPR87Q9BY21 358 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 ZNF341Q9BYN7 854 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.94□□□□□ -1.14
SMG1-204ENST00000561940 PCDHGB6Q9Y5F9 930 aa7.94□□□□□ -1.14
SMG1-204ENST00000561940 PMM2O15305 246 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 PHF2O75151 1096 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 ENDOD1O94919 500 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 C1SP09871 688 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 CDC42EP1Q00587 391 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 CNGB1Q14028 1251 aaPredicted RBP7.93□□□□□ -1.14
SMG1-204ENST00000561940 C19orf54Q5BKX5 351 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 MFSD5Q6N075 450 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 FAM180AQ6UWF9 173 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 SRGAP1Q7Z6B7 1085 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 KIAA0319LQ8IZA0 1049 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 SVIPQ8NHG7 77 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 ST8SIA2Q92186 375 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 CLPTM1LQ96KA5 538 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 NT5C1BQ96P26 610 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 UHRF1Q96T88 793 aaPredicted RBP7.93□□□□□ -1.14
SMG1-204ENST00000561940 ZNF747Q9BV97 191 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 PCGF6Q9BYE7 350 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 BHMT2Q9H2M3 363 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 TDP1Q9NUW8 608 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 USP25Q9UHP3 1055 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 STXBP5LQ9Y2K9 1186 aa7.93□□□□□ -1.14
SMG1-204ENST00000561940 CYP27B1O15528 508 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 ITGA10O75578 1167 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 AMY1AP04745 511 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 NBPF7P0C2Y1 421 aaPredicted RBP7.92□□□□□ -1.14
SMG1-204ENST00000561940 GYPEP15421 78 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 GZMKP49863 264 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 PER3P56645 1201 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 APBA1Q02410 837 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 NOGQ13253 232 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 MRPL49Q13405 166 aaKnown RBP7.92□□□□□ -1.14
SMG1-204ENST00000561940 FOXE3Q13461 319 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 BIRC2Q13490 618 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 PPP4R3AQ6IN85 833 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 TTC7BQ86TV6 843 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 FAM43AQ8N2R8 423 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 OR7D4Q8NG98 312 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 KLHDC4Q8TBB5 520 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 PARD3BQ8TEW8 1205 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 TMX3Q96JJ7 454 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 MRGPRX4Q96LA9 322 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 CDC5LQ99459 802 aaKnown RBP7.92□□□□□ -1.14
SMG1-204ENST00000561940 VRK1Q99986 396 aaPredicted RBP7.92□□□□□ -1.14
SMG1-204ENST00000561940 ARMT1Q9H993 441 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 GPRC5DQ9NZD1 345 aa7.92□□□□□ -1.14
SMG1-204ENST00000561940 ARID4BQ4LE39 1312 aaPredicted RBP7.92□□□□□ -1.14
SMG1-204ENST00000561940 TPD52L2O43399 206 aaKnown RBP7.91□□□□□ -1.14
SMG1-204ENST00000561940 SGTAO43765 313 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 MYL3P08590 195 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 FPR1P21462 350 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 MAN2A2P49641 1150 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 AGFG1P52594 562 aaKnown RBP7.91□□□□□ -1.14
SMG1-204ENST00000561940 WNT3AP56704 352 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 ZXDAP98168 799 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 HDAC1Q13547 482 aaPredicted RBP7.91□□□□□ -1.14
SMG1-204ENST00000561940 KIAA0753Q2KHM9 967 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 ANO6Q4KMQ2 910 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 TRMT2AQ8IZ69 625 aaKnown RBP7.91□□□□□ -1.14
SMG1-204ENST00000561940 MDGA1Q8NFP4 955 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 STON2Q8WXE9 905 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 MNTQ99583 582 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 APOL5Q9BWW9 433 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 MANSC1Q9H8J5 431 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 BCO1Q9HAY6 547 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 KMT5AQ9NQR1 393 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 STAP2Q9UGK3 403 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 AJAP1Q9UKB5 411 aaPredicted RBP7.91□□□□□ -1.14
SMG1-204ENST00000561940 HDAC5Q9UQL6 1122 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 PCDHA3Q9Y5H8 950 aa7.91□□□□□ -1.14
SMG1-204ENST00000561940 MYBBP1AQ9BQG0 1328 aaKnown RBP7.9□□□□□ -1.14
SMG1-204ENST00000561940 KRTAP23-1A1A580 65 aa7.9□□□□□ -1.14
SMG1-204ENST00000561940 IPO13O94829 963 aaKnown RBP7.9□□□□□ -1.14
SMG1-204ENST00000561940 HRGP04196 525 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms