RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 ACOT2P49753 483 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 RWDD2BP57060 319 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 OSTNP61366 133 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 ADAM9Q13443 819 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 LRRC55Q6ZSA7 311 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 ZC3H3Q8IXZ2 948 aaKnown RBP12.64□□□□□ -0.39
HERC1-214ENST00000561400 THNSL1Q8IYQ7 743 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 MIEF2Q96C03 454 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 TSG101Q99816 390 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 TRIM6Q9C030 488 aaPredicted RBP12.64□□□□□ -0.39
HERC1-214ENST00000561400 TSPY26PQ9H489 355 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 CPSF2Q9P2I0 782 aaKnown RBP12.64□□□□□ -0.39
HERC1-214ENST00000561400 IPPQ9Y573 584 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 PCDHB2Q9Y5E7 798 aa12.64□□□□□ -0.39
HERC1-214ENST00000561400 MEIS3P2A8K0S8 358 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 OGTO15294 1046 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 MYBL2P10244 700 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 ATF7P17544 494 aaPredicted RBP12.63□□□□□ -0.39
HERC1-214ENST00000561400 FKBP3Q00688 224 aaKnown RBP12.63□□□□□ -0.39
HERC1-214ENST00000561400 IKBKEQ14164 716 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 NCAPHQ15003 741 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 IQCB1Q15051 598 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 DCAF4L1Q3SXM0 396 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 MMS22LQ6ZRQ5 1243 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 ZNF365Q70YC5 407 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 SLC24A5Q71RS6 500 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 OTOP2Q7RTS6 562 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 CSGALNACT2Q8N6G5 542 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 RDH13Q8NBN7 331 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 ENOX1Q8TC92 643 aaKnown RBP12.63□□□□□ -0.39
HERC1-214ENST00000561400 THOC1Q96FV9 657 aaKnown RBP12.63□□□□□ -0.39
HERC1-214ENST00000561400 FBXL18Q96ME1 805 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 LBHD1Q9BQE6 289 aaPredicted RBP12.63□□□□□ -0.39
HERC1-214ENST00000561400 BPIFA3Q9BQP9 254 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 FAM213AQ9BRX8 229 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 NAT10Q9H0A0 1025 aaKnown RBP12.63□□□□□ -0.39
HERC1-214ENST00000561400 RNF39Q9H2S5 420 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 FRMD4BQ9Y2L6 1034 aa12.63□□□□□ -0.39
HERC1-214ENST00000561400 ZNF623O75123 536 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 IBSPP21815 317 aaPredicted RBP12.62□□□□□ -0.39
HERC1-214ENST00000561400 FAM189BP81408 668 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 TMEM240Q5SV17 173 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.62□□□□□ -0.393e-7■□□□□ 8.1
HERC1-214ENST00000561400 CBWD2Q8IUF1 395 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 DHX40Q8IX18 779 aaKnown RBP12.62□□□□□ -0.39
HERC1-214ENST00000561400 GPD1LQ8N335 351 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 AOPEPQ8N6M6 819 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 XXYLT1Q8NBI6 393 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 NOC3LQ8WTT2 800 aaKnown RBP12.62□□□□□ -0.39
HERC1-214ENST00000561400 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.62□□□□□ -0.392e-7■■□□□ 12.2
HERC1-214ENST00000561400 SRRTQ9BXP5 876 aaKnown RBP12.62□□□□□ -0.39
HERC1-214ENST00000561400 CBX8Q9HC52 389 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 SNTG2Q9NY99 539 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 RRP15Q9Y3B9 282 aaKnown RBP12.62□□□□□ -0.39
HERC1-214ENST00000561400 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
HERC1-214ENST00000561400 EXOC3O60645 756 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 AKAP3O75969 853 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 STAG3L1P0CL83 205 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 AKAP5P24588 427 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 RPL13P26373 211 aaKnown RBP12.62□□□□□ -0.39
HERC1-214ENST00000561400 GRM5P41594 1212 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 MAGEA10P43363 369 aaPredicted RBP12.62□□□□□ -0.39
HERC1-214ENST00000561400 MYL5Q02045 173 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 TBC1D25Q3MII6 688 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 SPATA1Q5VX52 437 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 CEP135Q66GS9 1140 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 MRPL10Q7Z7H8 261 aaKnown RBP12.62□□□□□ -0.39
HERC1-214ENST00000561400 ZNF598Q86UK7 904 aaKnown RBP12.62□□□□□ -0.39
HERC1-214ENST00000561400 ECHDC2Q86YB7 292 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 IRF2BP1Q8IU81 584 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 LPPQ93052 612 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 SH3GL3Q99963 347 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 APOL6Q9BWW8 343 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 SAMSN1Q9NSI8 373 aaKnown RBP12.62□□□□□ -0.39
HERC1-214ENST00000561400 CPSF3Q9UKF6 684 aaKnown RBP12.62□□□□□ -0.39
HERC1-214ENST00000561400 NFE2L3Q9Y4A8 694 aa12.62□□□□□ -0.39
HERC1-214ENST00000561400 PDCD11Q14690 1871 aaKnown RBP12.61□□□□□ -0.39
HERC1-214ENST00000561400 RALGAPA2Q2PPJ7 1873 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 ABHD14A-ACY1A0A1B0GW23 586 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 CETN3O15182 167 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 EXTL3O43909 919 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 FGBP02675 491 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 ADRB2P07550 413 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 HSP90AA4PQ58FG1 418 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 LUZP1Q86V48 1076 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 FMNL3Q8IVF7 1028 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 CRIPAKQ8N1N5 446 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 CXCL16Q9H2A7 254 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 HSD3B7Q9H2F3 369 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 C1orf112Q9NSG2 853 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 H0YGN5 161 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 KIAA0391O15091 583 aaKnown RBP12.61□□□□□ -0.39
HERC1-214ENST00000561400 LDHAP00338 332 aaKnown RBP12.61□□□□□ -0.39
HERC1-214ENST00000561400 TPM1P09493 284 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 RAB27AP51159 221 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 WNT7BP56706 349 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 ENOX2Q16206 610 aaKnown RBP12.61□□□□□ -0.39
HERC1-214ENST00000561400 SNRNP35Q16560 246 aaKnown RBP12.61□□□□□ -0.39
HERC1-214ENST00000561400 AGMOQ6ZNB7 445 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 RNF169Q8NCN4 708 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms