RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 PPP2R3AQ06190 1150 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 GPM6BQ13491 265 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 CAMK1Q14012 370 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 SURF1Q15526 300 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 EDRF1Q3B7T1 1238 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 SPOUT1Q5T280 376 aaKnown RBP10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 Q7L0L9 218 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 BRSK2Q8IWQ3 736 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 RNF168Q8IYW5 571 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 XXYLT1Q8NBI6 393 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 ZSWIM2Q8NEG5 633 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 SPPL3Q8TCT6 385 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 DDX27Q96GQ7 796 aaKnown RBP10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 DHTKD1Q96HY7 919 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 IGSF21Q96ID5 467 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 UROC1Q96N76 676 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 CDX2Q99626 313 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 FAM213AQ9BRX8 229 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 NUP62CLQ9H1M0 184 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 PRDM12Q9H4Q4 367 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 C2CD2Q9Y426 696 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 REV3LO60673 3130 aa10.47□□□□□ -0.73
RABGGTA-221ENST00000561055 CLIC2O15247 247 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 GRM6O15303 877 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 XPOTO43592 962 aaKnown RBP10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 CALUO43852 315 aaPredicted RBP10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 LRPAP1P30533 357 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 KRT17Q04695 432 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 SOX4Q06945 474 aaPredicted RBP10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 ENPEPQ07075 957 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 CAMK4Q16566 473 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 UPP1Q16831 310 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 SPATA1Q5VX52 437 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 PDE12Q6L8Q7 609 aaKnown RBP10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 DCLRE1AQ6PJP8 1040 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 DDX53Q86TM3 631 aaKnown RBP10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 ZC3H3Q8IXZ2 948 aaKnown RBP10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 SAAL1Q96ER3 474 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 MFSD14AQ96MC6 490 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 COLEC11Q9BWP8 271 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 PCIF1Q9H4Z3 704 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 CERS4Q9HA82 394 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 MARCH5Q9NX47 278 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 PUF60Q9UHX1 559 aaKnown RBP10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 UBQLN1Q9UMX0 589 aaKnown RBP10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 MAPK8IP1Q9UQF2 711 aa10.46□□□□□ -0.73
RABGGTA-221ENST00000561055 TSC2P49815 1807 aa10.46□□□□□ -0.74
RABGGTA-221ENST00000561055 UNC80Q8N2C7 3258 aa10.46□□□□□ -0.74
RABGGTA-221ENST00000561055 BRWD1Q9NSI6 2320 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 PLXNA3P51805 1871 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 GOLGA8IPA6NC78 632 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 GOLGA8JA6NMD2 632 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 PPP1R3GB7ZBB8 358 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 NT5C1B-RDH14C9J2C7 533 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 RFXAPO00287 272 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 NR3C1P04150 777 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 PTMSP20962 102 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 PAX3P23760 479 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 CCNE1P24864 410 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 DNAJB1P25685 340 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 RPL13P26373 211 aaKnown RBP10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 PBX3P40426 434 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 CLDN10P78369 228 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 LRRC63Q05C16 580 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 STIM1Q13586 685 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 ADGRE1Q14246 886 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 SNRNP35Q16560 246 aaKnown RBP10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 PTPROQ16827 1216 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 GLRA4Q5JXX5 417 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 JADE1Q6IE81 842 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 CD300LGQ6UXG3 332 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 TMEM173Q86WV6 379 aaPredicted RBP10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 CBWD2Q8IUF1 395 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 GPR65Q8IYL9 337 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 SMYD4Q8IYR2 804 aaPredicted RBP10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 POF1BQ8WVV4 589 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 MRPL38Q96DV4 380 aaKnown RBP10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 TMEM169Q96HH4 297 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 FAM161BQ96MY7 647 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 GAS2L1Q99501 681 aaPredicted RBP10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 PAAF1Q9BRP4 392 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 ALG13Q9NP73 1137 aaKnown RBP10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 RBAKQ9NYW8 714 aaPredicted RBP10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 MTUS1Q9ULD2 1270 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 IRAK3Q9Y616 596 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 MTCH2Q9Y6C9 303 aa10.45□□□□□ -0.74
RABGGTA-221ENST00000561055 ANO9A1A5B4 782 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 PSMA7O14818 248 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 FSCN2O14926 492 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 CD44P16070 742 aaKnown RBP10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 OR1G1P47890 313 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 CYP2J2P51589 502 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 CLCNKBP51801 687 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 WNT7BP56706 349 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 CYP24A1Q07973 514 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 ELAVL2Q12926 359 aaKnown RBP10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 TMEM132DQ14C87 1099 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 PSMD6Q15008 389 aa10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 CT47A1Q5JQC4 288 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-221ENST00000561055 ANKRD40Q6AI12 368 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms