RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 LACTBL1A8MY62 500 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 NR1I2O75469 434 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 KIF4AO95239 1232 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 KCNA5P22460 613 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 MATR3P43243 847 aaKnown RBP eCLIP16.65■□□□□ 0.261e-7■■□□□ 11.4
SNRPA1-213ENST00000560856 KCNQ1P51787 676 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 KYAT1Q16773 422 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 UPP1Q16831 310 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 LEXMQ3ZCV2 418 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 KIAA0319Q5VV43 1072 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 FUT10Q6P4F1 479 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 TMEM130Q8N3G9 435 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 ZSWIM2Q8NEG5 633 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 ZNF507Q8TCN5 953 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 C18orf25Q96B23 403 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 CDCA3Q99618 268 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 STK39Q9UEW8 545 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 EXOC7Q9UPT5 735 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 NCOR1O75376 2440 aa16.65■□□□□ 0.26
SNRPA1-213ENST00000560856 H3BQ06 376 aaPredicted RBP16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 TMEM189-UBE2V1I3L0A0 370 aa16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 EIF3DO15371 548 aaKnown RBP eCLIP16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 CLASP2O75122 1294 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 ZNF202O95125 648 aa16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 CLCNKBP51801 687 aa16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 POSTNQ15063 836 aa16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 TPRNQ4KMQ1 711 aa16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 DCLRE1AQ6PJP8 1040 aa16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 TMEM184AQ6ZMB5 413 aa16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 KRBA2Q6ZNG9 492 aa16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 C3orf58Q8NDZ4 430 aa16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 ENGASEQ8NFI3 743 aa16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 SCFD1Q8WVM8 642 aa16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 MSLNLQ96KJ4 702 aa16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 AGO2Q9UKV8 859 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-213ENST00000560856 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 TADA2AO75478 443 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 PRR29P0C7W0 189 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 GARTP22102 1010 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 ANP32AP39687 249 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 ACOT2P49753 483 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 POU5F1Q01860 360 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 DSG1Q02413 1049 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 SPAG1Q07617 926 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 SNW1Q13573 536 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 AAK1Q2M2I8 961 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 TJAP1Q5JTD0 557 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 GPR65Q8IYL9 337 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 FMR1NBQ8N0W7 255 aaPredicted RBP16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 HASPINQ8TF76 798 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 SLC22A17Q8WUG5 538 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 B3GALT6Q96L58 329 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 UROC1Q96N76 676 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 CBWD1Q9BRT8 395 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 TMEM206Q9H813 350 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 RPF1Q9H9Y2 349 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 RXFP1Q9HBX9 757 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 SLC38A7Q9NVC3 462 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 CHMP5Q9NZZ3 219 aa16.63■□□□□ 0.25
SNRPA1-213ENST00000560856 CUL9Q8IWT3 2517 aa16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 TGFB1I1O43294 461 aa16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 MYL1P05976 194 aa16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 CNPP09543 421 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 RPL9P32969 192 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 DPYDQ12882 1025 aa16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 STK4Q13043 487 aa16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 BMS1Q14692 1282 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 BMT2Q1RMZ1 405 aa16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 KMT5BQ4FZB7 885 aa16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 SYCP3Q8IZU3 236 aa16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 POMGNT1Q8WZA1 660 aa16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 DDX27Q96GQ7 796 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 KLHL5Q96PQ7 755 aa16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 SLC39A2Q9NP94 309 aa16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 TUBGCP4Q9UGJ1 667 aa16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 BARX2Q9UMQ3 279 aaPredicted RBP16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 HCFC2Q9Y5Z7 792 aa16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 PDCD11Q14690 1871 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-213ENST00000560856 GRXCR2A6NFK2 248 aa16.61■□□□□ 0.25
SNRPA1-213ENST00000560856 PODXLO00592 558 aa16.61■□□□□ 0.25
SNRPA1-213ENST00000560856 B3GAT3O94766 335 aa16.61■□□□□ 0.25
SNRPA1-213ENST00000560856 LRPAP1P30533 357 aa16.61■□□□□ 0.25
SNRPA1-213ENST00000560856 GLUD2P49448 558 aa16.61■□□□□ 0.25
SNRPA1-213ENST00000560856 WNT7BP56706 349 aa16.61■□□□□ 0.25
SNRPA1-213ENST00000560856 USP41Q3LFD5 358 aa16.61■□□□□ 0.25
SNRPA1-213ENST00000560856 RTP2Q5QGT7 225 aa16.61■□□□□ 0.25
SNRPA1-213ENST00000560856 EP400NLQ6ZTU2 488 aa16.61■□□□□ 0.25
SNRPA1-213ENST00000560856 STXBP4Q6ZWJ1 553 aa16.61■□□□□ 0.25
SNRPA1-213ENST00000560856 CD302Q8IX05 232 aa16.61■□□□□ 0.25
SNRPA1-213ENST00000560856 KIAA0895Q8NCT3 520 aa16.61■□□□□ 0.25
SNRPA1-213ENST00000560856 TSPAN18Q96SJ8 248 aa16.61■□□□□ 0.25
SNRPA1-213ENST00000560856 MRPL17Q9NRX2 175 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-213ENST00000560856 SF3B1O75533 1304 aaKnown RBP eCLIP16.61■□□□□ 0.257e-7■■■■■ 63.2
SNRPA1-213ENST00000560856 TCF20Q9UGU0 1960 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 FSD2A1L4K1 749 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 C2CD2LO14523 706 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 TEX28O15482 410 aa16.6■□□□□ 0.25
SNRPA1-213ENST00000560856 RPN1P04843 607 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms