RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 PNPLA7Q6ZV29 1317 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 CCDC154A6NI56 674 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 GOLGA6L6A8MZA4 724 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 AKAP10O43572 662 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 RPS6KA4O75676 772 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 HSP90B1P14625 803 aaKnown RBP5.84□□□□□ -1.47
PSMA4-221ENST00000560842 VCAM1P19320 739 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 AKAP5P24588 427 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 PCSK1P29120 753 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 PTGS2P35354 604 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 PER3P56645 1201 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 CDC42EP1Q00587 391 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 C3orf36Q3SXR2 165 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 MIGA2Q7L4E1 593 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 ZGPATQ8N5A5 531 aaKnown RBP5.84□□□□□ -1.47
PSMA4-221ENST00000560842 SLC35B2Q8TB61 432 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 NTN5Q8WTR8 489 aaPredicted RBP5.84□□□□□ -1.47
PSMA4-221ENST00000560842 ATXN2LQ8WWM7 1075 aaKnown RBP5.84□□□□□ -1.47
PSMA4-221ENST00000560842 DMRTA2Q96SC8 542 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 CDH19Q9H159 772 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 NRDE2Q9H7Z3 1164 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 PTGFRNQ9P2B2 879 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 AJAP1Q9UKB5 411 aaPredicted RBP5.84□□□□□ -1.47
PSMA4-221ENST00000560842 ANKRD6Q9Y2G4 727 aa5.84□□□□□ -1.47
PSMA4-221ENST00000560842 TEX33O43247 280 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 RFPL1O75677 317 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 POU2F2P09086 479 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 SNRPA1P09661 255 aaKnown RBP5.83□□□□□ -1.48
PSMA4-221ENST00000560842 FPR1P21462 350 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 RAB27AP51159 221 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 DSC2Q02487 901 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 TARDBPQ13148 414 aaKnown RBP eCLIP5.83□□□□□ -1.48
PSMA4-221ENST00000560842 TOB2Q14106 344 aaPredicted RBP5.83□□□□□ -1.48
PSMA4-221ENST00000560842 ODR4Q5SWX8 454 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 AFMIDQ63HM1 303 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 METRNLQ641Q3 311 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 SEM1Q6ZVN7 128 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 XYLT1Q86Y38 959 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 NSUN6Q8TEA1 469 aaKnown RBP5.83□□□□□ -1.48
PSMA4-221ENST00000560842 HAS1Q92839 578 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 HSPBAP1Q96EW2 488 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 MRGPRX4Q96LA9 322 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 UHRF1Q96T88 793 aaPredicted RBP5.83□□□□□ -1.48
PSMA4-221ENST00000560842 GPR87Q9BY21 358 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 RTFDC1Q9BY42 306 aaPredicted RBP5.83□□□□□ -1.48
PSMA4-221ENST00000560842 SENP6Q9GZR1 1112 aaPredicted RBP5.83□□□□□ -1.48
PSMA4-221ENST00000560842 AASDHPPTQ9NRN7 309 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 TMEM140Q9NV12 185 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 SLC23A1Q9UHI7 598 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 PNMA8BQ9ULN7 279 aaPredicted RBP5.83□□□□□ -1.48
PSMA4-221ENST00000560842 PCDHB1Q9Y5F3 818 aa5.83□□□□□ -1.48
PSMA4-221ENST00000560842 CFAP20Q9Y6A4 193 aaKnown RBP5.83□□□□□ -1.48
PSMA4-221ENST00000560842 MYBBP1AQ9BQG0 1328 aaKnown RBP5.82□□□□□ -1.48
PSMA4-221ENST00000560842 PRR5-ARHGAP8B1AHC4 643 aa5.82□□□□□ -1.48
PSMA4-221ENST00000560842 GPR32O75388 356 aa5.82□□□□□ -1.48
PSMA4-221ENST00000560842 DDCP20711 480 aa5.82□□□□□ -1.48
PSMA4-221ENST00000560842 PDCP20941 246 aa5.82□□□□□ -1.48
PSMA4-221ENST00000560842 CLRN1P58418 232 aa5.82□□□□□ -1.48
PSMA4-221ENST00000560842 CTXN1P60606 82 aa5.82□□□□□ -1.48
PSMA4-221ENST00000560842 IL10RAQ13651 578 aa5.82□□□□□ -1.48
PSMA4-221ENST00000560842 NFE2Q16621 373 aaPredicted RBP5.82□□□□□ -1.48
PSMA4-221ENST00000560842 RRP12Q5JTH9 1297 aaKnown RBP5.82□□□□□ -1.48
PSMA4-221ENST00000560842 DACT2Q5SW24 774 aa5.82□□□□□ -1.48
PSMA4-221ENST00000560842 SYT12Q8IV01 421 aa5.82□□□□□ -1.48
PSMA4-221ENST00000560842 RHOT1Q8IXI2 618 aa5.82□□□□□ -1.48
PSMA4-221ENST00000560842 MIER2Q8N344 545 aa5.82□□□□□ -1.48
PSMA4-221ENST00000560842 IFI44Q8TCB0 444 aa5.82□□□□□ -1.48
PSMA4-221ENST00000560842 CALCOCO1Q9P1Z2 691 aa5.82□□□□□ -1.48
PSMA4-221ENST00000560842 PCDHA13Q9Y5I0 950 aa5.82□□□□□ -1.48
PSMA4-221ENST00000560842 MASP2O00187 686 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 HK1P19367 917 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 MGAT1P26572 445 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 ALDH1A3P47895 512 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 FXR1P51114 621 aaKnown RBP eCLIP5.81□□□□□ -1.48
PSMA4-221ENST00000560842 CNGB1Q14028 1251 aaPredicted RBP5.81□□□□□ -1.48
PSMA4-221ENST00000560842 PPP4R3AQ6IN85 833 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 GLCCI1Q86VQ1 547 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 PLXDC1Q8IUK5 500 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 MB21D1Q8N884 522 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 ZFP28Q8NHY6 868 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 CCHCR1Q8TD31 782 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 STON2Q8WXE9 905 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 NDC1Q9BTX1 674 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 MRI1Q9BV20 369 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 EPC1Q9H2F5 836 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 LDAHQ9H6V9 325 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 RIOX1Q9H6W3 641 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 TDP1Q9NUW8 608 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 IP6K2Q9UHH9 426 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 PACSIN3Q9UKS6 424 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 HDAC5Q9UQL6 1122 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 ACTL7AQ9Y615 435 aa5.81□□□□□ -1.48
PSMA4-221ENST00000560842 TRIM24O15164 1050 aa5.8□□□□□ -1.48
PSMA4-221ENST00000560842 S100BP04271 92 aaPredicted RBP5.8□□□□□ -1.48
PSMA4-221ENST00000560842 ZSCAN20P17040 1043 aaPredicted RBP5.8□□□□□ -1.48
PSMA4-221ENST00000560842 C21orf58P58505 322 aa5.8□□□□□ -1.48
PSMA4-221ENST00000560842 RAB39AQ14964 217 aa5.8□□□□□ -1.48
PSMA4-221ENST00000560842 UAP1L1Q3KQV9 507 aa5.8□□□□□ -1.48
PSMA4-221ENST00000560842 RABL3Q5HYI8 236 aa5.8□□□□□ -1.48
PSMA4-221ENST00000560842 ZKSCAN2Q63HK3 967 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms