RNA–Protein interactions for RNA: ENST00000560660.1

IVD-212, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 2

Gene IVD, Length 638 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-212ENST00000560660 LOXL4Q96JB6 756 aa13.12□□□□□ -0.31
IVD-212ENST00000560660 ADAM33Q9BZ11 813 aa13.12□□□□□ -0.31
IVD-212ENST00000560660 AVENQ9NQS1 362 aaPredicted RBP13.12□□□□□ -0.31
IVD-212ENST00000560660 WASF3Q9UPY6 502 aa13.12□□□□□ -0.31
IVD-212ENST00000560660 LAMA1P25391 3075 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 TICRRQ7Z2Z1 1910 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 SETXQ7Z333 2677 aaKnown RBP13.11□□□□□ -0.31
IVD-212ENST00000560660 KLF18A0A0U1RQI7 1052 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 WDR27A2RRH5 827 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 TMEM8BA6NDV4 472 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 EML1O00423 815 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 B4GALT5O43286 388 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 IGFBP6P24592 240 aaPredicted RBP13.11□□□□□ -0.31
IVD-212ENST00000560660 RFC5P40937 340 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 RAP1GAPP47736 663 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 QARSP47897 775 aaKnown RBP13.11□□□□□ -0.31
IVD-212ENST00000560660 SOX9P48436 509 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 PXNP49023 591 aaPredicted RBP13.11□□□□□ -0.31
IVD-212ENST00000560660 ZNF252P-AS1Q0IIN9 211 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 ELAVL2Q12926 359 aaKnown RBP13.11□□□□□ -0.31
IVD-212ENST00000560660 EMC2Q15006 297 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 WDR44Q5JSH3 913 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 PLA2G2CQ5R387 149 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 TCEAL6Q6IPX3 200 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 CSGALNACT1Q8TDX6 532 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 TBCKQ8TEA7 893 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 SMARCD2Q92925 531 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 TCEAL3Q969E4 200 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 LSG1Q9H089 658 aaKnown RBP13.11□□□□□ -0.31
IVD-212ENST00000560660 SLKQ9H2G2 1235 aaPredicted RBP13.11□□□□□ -0.31
IVD-212ENST00000560660 WRAP73Q9P2S5 460 aaPredicted RBP13.11□□□□□ -0.31
IVD-212ENST00000560660 NBEAQ8NFP9 2946 aa13.11□□□□□ -0.31
IVD-212ENST00000560660 SLC38A8A6NNN8 435 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 C4orf47A7E2U8 309 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 RPP40O75818 363 aaKnown RBP13.1□□□□□ -0.31
IVD-212ENST00000560660 TDP2O95551 362 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 CCDC192P0DO97 292 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 ELF1P32519 619 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 CCR2P41597 374 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 KPNA1P52294 538 aaPredicted RBP13.1□□□□□ -0.31
IVD-212ENST00000560660 EXOSC10Q01780 885 aaKnown RBP13.1□□□□□ -0.31
IVD-212ENST00000560660 MBTD1Q05BQ5 628 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 SPIRE1Q08AE8 756 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 NECTIN1Q15223 517 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 AMHR2Q16671 573 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 DGKKQ5KSL6 1271 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 SLC27A1Q6PCB7 646 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.1□□□□□ -0.31
IVD-212ENST00000560660 MFSD6LQ8IWD5 586 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 TTC8Q8TAM2 541 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 GAB3Q8WWW8 586 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 ZCCHC14Q8WYQ9 949 aaKnown RBP13.1□□□□□ -0.31
IVD-212ENST00000560660 GATA6Q92908 595 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 SCNM1Q9BWG6 230 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 CXCL16Q9H2A7 254 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 MTRRQ9UBK8 725 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 GTF3C3Q9Y5Q9 886 aa13.1□□□□□ -0.31
IVD-212ENST00000560660 DSPP15924 2871 aaKnown RBP13.1□□□□□ -0.31
IVD-212ENST00000560660 AKAP13Q12802 2813 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 A0A1B0GUA9 196 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 ARHGEF37A1IGU5 675 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 PRRG1O14668 218 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 ZNF197O14709 1029 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 ZBTB39O15060 712 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 PRPF3O43395 683 aaKnown RBP13.09□□□□□ -0.31
IVD-212ENST00000560660 ZIC2O95409 532 aaPredicted RBP13.09□□□□□ -0.31
IVD-212ENST00000560660 THP07101 528 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 COL4A2P08572 1712 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 GJA1P17302 382 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 FGFR3P22607 806 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 HOXA6P31267 233 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 MPLP40238 635 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 MLLT6P55198 1093 aaPredicted RBP13.09□□□□□ -0.31
IVD-212ENST00000560660 TFDP1Q14186 410 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 MXD4Q14582 209 aaPredicted RBP13.09□□□□□ -0.31
IVD-212ENST00000560660 XKR9Q5GH70 373 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 CYP4A22Q5TCH4 519 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 SH3PXD2AQ5TCZ1 1133 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 PDZD4Q76G19 769 aaPredicted RBP13.09□□□□□ -0.31
IVD-212ENST00000560660 ETNPPLQ8TBG4 499 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 DEPDC1BQ8WUY9 529 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 MTRQ99707 1265 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 VPS45Q9NRW7 570 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 PPME1Q9Y570 386 aa13.09□□□□□ -0.31
IVD-212ENST00000560660 CYP3A7-CYP3A51PA0A087WV96 503 aa13.08□□□□□ -0.32
IVD-212ENST00000560660 HEPACAM2A8MVW5 462 aa13.08□□□□□ -0.32
IVD-212ENST00000560660 TAF4O00268 1085 aa13.08□□□□□ -0.32
IVD-212ENST00000560660 ARNTLO00327 626 aa13.08□□□□□ -0.32
IVD-212ENST00000560660 PTGESO14684 152 aa13.08□□□□□ -0.32
IVD-212ENST00000560660 EXTL3O43909 919 aa13.08□□□□□ -0.32
IVD-212ENST00000560660 DKC1O60832 514 aaKnown RBP eCLIP13.08□□□□□ -0.32
IVD-212ENST00000560660 MICAL2O94851 1124 aa13.08□□□□□ -0.32
IVD-212ENST00000560660 P4HBP07237 508 aaKnown RBP13.08□□□□□ -0.32
IVD-212ENST00000560660 CYP3A7P24462 503 aa13.08□□□□□ -0.32
IVD-212ENST00000560660 TKTP29401 623 aaKnown RBP13.08□□□□□ -0.32
IVD-212ENST00000560660 YWHABP31946 246 aaKnown RBP13.08□□□□□ -0.32
IVD-212ENST00000560660 ARPP19P56211 112 aa13.08□□□□□ -0.32
IVD-212ENST00000560660 TXNDC11Q6PKC3 985 aa13.08□□□□□ -0.32
IVD-212ENST00000560660 OTUD6AQ7L8S5 288 aa13.08□□□□□ -0.32
IVD-212ENST00000560660 GPIHBP1Q8IV16 184 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms