RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 EEF1DP3Q658K8 133 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 MRPL14Q6P1L8 145 aaKnown RBP8.75□□□□□ -1.01
LRRC28-219ENST00000560483 AGMOQ6ZNB7 445 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 LRRC55Q6ZSA7 311 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 STXBP4Q6ZWJ1 553 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 TMC7Q7Z402 723 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 RBM23Q86U06 439 aaKnown RBP8.75□□□□□ -1.01
LRRC28-219ENST00000560483 FSIP1Q8NA03 581 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 TMEM161BQ8NDZ6 487 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 SPIRE2Q8WWL2 714 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 CLP1Q92989 425 aaKnown RBP8.75□□□□□ -1.01
LRRC28-219ENST00000560483 MRPL38Q96DV4 380 aaKnown RBP8.75□□□□□ -1.01
LRRC28-219ENST00000560483 CCDC34Q96HJ3 373 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 TRAIPQ9BWF2 469 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 CCDC113Q9H0I3 377 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 BLZF1Q9H2G9 400 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 CUEDC2Q9H467 287 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 CWH43Q9H720 699 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 RC3H2Q9HBD1 1191 aaKnown RBP8.75□□□□□ -1.01
LRRC28-219ENST00000560483 TLR9Q9NR96 1032 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 TOPORSQ9NS56 1045 aaPredicted RBP8.75□□□□□ -1.01
LRRC28-219ENST00000560483 ARHGAP28Q9P2N2 729 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 RCOR1Q9UKL0 485 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 PLAGL2Q9UPG8 496 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 EXOC7Q9UPT5 735 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 GIT1Q9Y2X7 761 aa8.75□□□□□ -1.01
LRRC28-219ENST00000560483 PRUNE2Q8WUY3 3088 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 A0A087X0B3 334 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 CASTOR2A6NHX0 329 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 C5orf67F2Z3F1 127 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 CLSTN1O94985 981 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 THP07101 528 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 CCNYL3P0C7X3 344 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 MAPTP10636 758 aaKnown RBP8.74□□□□□ -1.01
LRRC28-219ENST00000560483 PFKFB1P16118 471 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 SYKP43405 635 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 NCKAP1LP55160 1127 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 NOLC1Q14978 699 aaKnown RBP eCLIP8.74□□□□□ -1.01
LRRC28-219ENST00000560483 SEZ6Q53EL9 994 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 ZC2HC1CQ53FD0 456 aaPredicted RBP8.74□□□□□ -1.01
LRRC28-219ENST00000560483 GLRA4Q5JXX5 417 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 AXDND1Q5T1B0 1012 aaPredicted RBP8.74□□□□□ -1.01
LRRC28-219ENST00000560483 L1TD1Q5T7N2 865 aaKnown RBP8.74□□□□□ -1.01
LRRC28-219ENST00000560483 RESP18Q5W5W9 173 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 ADALQ6DHV7 355 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 KIAA1841Q6NSI8 718 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 MPZL3Q6UWV2 235 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 MRPL10Q7Z7H8 261 aaKnown RBP8.74□□□□□ -1.01
LRRC28-219ENST00000560483 ZNF280BQ86YH2 543 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 LRRC15Q8TF66 581 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 RSPH1Q8WYR4 309 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 MRPS27Q92552 414 aaKnown RBP8.74□□□□□ -1.01
LRRC28-219ENST00000560483 RABGGTAQ92696 567 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 P2RX5Q93086 422 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 CCDC47Q96A33 483 aaKnown RBP8.74□□□□□ -1.01
LRRC28-219ENST00000560483 ZBTB45Q96K62 511 aaPredicted RBP8.74□□□□□ -1.01
LRRC28-219ENST00000560483 ACAP3Q96P50 834 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 ACO2Q99798 780 aaKnown RBP8.74□□□□□ -1.01
LRRC28-219ENST00000560483 TCF25Q9BQ70 676 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 MSTO1Q9BUK6 570 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 LMAN2LQ9H0V9 348 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 TNMDQ9H2S6 317 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 NSUN3Q9H649 340 aaKnown RBP8.74□□□□□ -1.01
LRRC28-219ENST00000560483 NRDE2Q9H7Z3 1164 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 MAGEF1Q9HAY2 307 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 CLDND1Q9NY35 253 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 LMCD1Q9NZU5 365 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 THEGQ9P2T0 379 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 DNAJB4Q9UDY4 337 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 SERTAD1Q9UHV2 236 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 TBX20Q9UMR3 447 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 TNFSF13BQ9Y275 285 aa8.74□□□□□ -1.01
LRRC28-219ENST00000560483 MORC2Q9Y6X9 1032 aaPredicted RBP8.74□□□□□ -1.01
LRRC28-219ENST00000560483 TRIP11Q15643 1979 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 CITO14578 2027 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 PLXNA4Q9HCM2 1894 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.73□□□□□ -1.01
LRRC28-219ENST00000560483 CARNS1A5YM72 827 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 C2CD2LO14523 706 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 TADA2AO75478 443 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 TOM1L1O75674 476 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 EDN1P05305 212 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 SRGAP2BP0DMP2 458 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 MCF2P10911 925 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 CMA1P23946 247 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 NRIP1P48552 1158 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 SLC11A1P49279 550 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 NDUFV1P49821 464 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 AFF1P51825 1210 aaKnown RBP8.73□□□□□ -1.01
LRRC28-219ENST00000560483 GRIK3Q13003 919 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 COASYQ13057 564 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 TCEAL5Q5H9L2 206 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 LLGL2Q6P1M3 1020 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.73□□□□□ -1.01
LRRC28-219ENST00000560483 GRAMD1CQ8IYS0 662 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 VPS52Q8N1B4 723 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 SPPL3Q8TCT6 385 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 HASPINQ8TF76 798 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 POMGNT1Q8WZA1 660 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 ACCSQ96QU6 501 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms