RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 OR7D4Q8NG98 312 aa4.14□□□□□ -1.75
SPG11-222ENST00000560435 SSH3Q8TE77 659 aa4.14□□□□□ -1.75
SPG11-222ENST00000560435 KCTD10Q9H3F6 313 aa4.14□□□□□ -1.75
SPG11-222ENST00000560435 CPNE5Q9HCH3 593 aa4.14□□□□□ -1.75
SPG11-222ENST00000560435 USP25Q9UHP3 1055 aa4.14□□□□□ -1.75
SPG11-222ENST00000560435 ZNF804BA4D1E1 1349 aa4.14□□□□□ -1.75
SPG11-222ENST00000560435 AATKQ6ZMQ8 1374 aa4.14□□□□□ -1.75
SPG11-222ENST00000560435 FAM83GA6ND36 823 aa4.13□□□□□ -1.75
SPG11-222ENST00000560435 POMCP01189 267 aa4.13□□□□□ -1.75
SPG11-222ENST00000560435 PTGER1P34995 402 aa4.13□□□□□ -1.75
SPG11-222ENST00000560435 SOX10P56693 466 aa4.13□□□□□ -1.75
SPG11-222ENST00000560435 SSBP2P81877 361 aaPredicted RBP4.13□□□□□ -1.75
SPG11-222ENST00000560435 ZBTB9Q96C00 473 aa4.13□□□□□ -1.75
SPG11-222ENST00000560435 MRI1Q9BV20 369 aa4.13□□□□□ -1.75
SPG11-222ENST00000560435 BCO1Q9HAY6 547 aa4.13□□□□□ -1.75
SPG11-222ENST00000560435 FLRT1Q9NZU1 646 aa4.13□□□□□ -1.75
SPG11-222ENST00000560435 SIK3Q9Y2K2 1263 aa4.13□□□□□ -1.75
SPG11-222ENST00000560435 MTO1Q9Y2Z2 717 aaKnown RBP4.13□□□□□ -1.75
SPG11-222ENST00000560435 WNT10BO00744 389 aa4.12□□□□□ -1.75
SPG11-222ENST00000560435 ONECUT2O95948 504 aa4.12□□□□□ -1.75
SPG11-222ENST00000560435 LSSP48449 732 aa4.12□□□□□ -1.75
SPG11-222ENST00000560435 RGS19P49795 217 aa4.12□□□□□ -1.75
SPG11-222ENST00000560435 NEK4P51957 841 aa4.12□□□□□ -1.75
SPG11-222ENST00000560435 LGALS4P56470 323 aa4.12□□□□□ -1.75
SPG11-222ENST00000560435 UBXN2BQ14CS0 331 aa4.12□□□□□ -1.75
SPG11-222ENST00000560435 GEN1Q17RS7 908 aa4.12□□□□□ -1.75
SPG11-222ENST00000560435 GJC2Q5T442 439 aaPredicted RBP4.12□□□□□ -1.75
SPG11-222ENST00000560435 AFMIDQ63HM1 303 aa4.12□□□□□ -1.75
SPG11-222ENST00000560435 C11orf87Q6NUJ2 197 aa4.12□□□□□ -1.75
SPG11-222ENST00000560435 GPR101Q96P66 508 aaPredicted RBP4.12□□□□□ -1.75
SPG11-222ENST00000560435 SPTLC3Q9NUV7 552 aa4.12□□□□□ -1.75
SPG11-222ENST00000560435 MOCS1Q9NZB8 636 aa4.12□□□□□ -1.75
SPG11-222ENST00000560435 KAT6AQ92794 2004 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 TRGV11A0A075B6L2 103 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 TRIM38O00635 465 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 TP73O15350 636 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 MPPED1O15442 326 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 PRSS23O95084 383 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 BMP15O95972 392 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 IGKV2-30P06310 120 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 LPLP06858 475 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 ATP5JP18859 108 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 SLC6A2P23975 617 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 MAPK10P53779 464 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 EIF2B5Q13144 721 aaKnown RBP4.11□□□□□ -1.75
SPG11-222ENST00000560435 FCRLBQ6BAA4 426 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 CRELD2Q6UXH1 353 aaPredicted RBP4.11□□□□□ -1.75
SPG11-222ENST00000560435 PEG10Q86TG7 708 aaKnown RBP4.11□□□□□ -1.75
SPG11-222ENST00000560435 FCRL4Q96PJ5 515 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 WNT6Q9Y6F9 365 aa4.11□□□□□ -1.75
SPG11-222ENST00000560435 YY2O15391 372 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 AKR1B10O60218 316 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 RAB11FIP3O75154 756 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 ASMTLO95671 621 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 RAP2AP10114 183 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 CKBP12277 381 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 IL2RBP14784 551 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 ADSLP30566 484 aaPredicted RBP4.1□□□□□ -1.75
SPG11-222ENST00000560435 GRIA3P42263 894 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 SCNN1BP51168 640 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 EXOSC10Q01780 885 aaKnown RBP4.1□□□□□ -1.75
SPG11-222ENST00000560435 SLC10A2Q12908 348 aaPredicted RBP4.1□□□□□ -1.75
SPG11-222ENST00000560435 LLGL1Q15334 1064 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 SF3B3Q15393 1217 aaKnown RBP4.1□□□□□ -1.75
SPG11-222ENST00000560435 NBPF8Q3BBV2 869 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 MTX3Q5HYI7 312 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 TSTD2Q5T7W7 516 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 OTUD7BQ6GQQ9 843 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 VWA1Q6PCB0 445 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 Q6ZVL8 140 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 VGLL2Q8N8G2 317 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 GPR156Q8NFN8 814 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 FBXO18Q8NFZ0 1043 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 RIN2Q8WYP3 895 aaPredicted RBP4.1□□□□□ -1.75
SPG11-222ENST00000560435 C8orf37Q96NL8 207 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 MED15Q96RN5 788 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 AOX1Q06278 1338 aa4.1□□□□□ -1.75
SPG11-222ENST00000560435 PROM1O43490 865 aa4.09□□□□□ -1.75
SPG11-222ENST00000560435 SRGNP10124 158 aa4.09□□□□□ -1.75
SPG11-222ENST00000560435 ECHS1P30084 290 aa4.09□□□□□ -1.75
SPG11-222ENST00000560435 SREBF1P36956 1147 aa4.09□□□□□ -1.75
SPG11-222ENST00000560435 SART3Q15020 963 aaKnown RBP4.09□□□□□ -1.75
SPG11-222ENST00000560435 CT83Q5H943 113 aa4.09□□□□□ -1.75
SPG11-222ENST00000560435 KAZNQ674X7 775 aa4.09□□□□□ -1.75
SPG11-222ENST00000560435 C11orf74Q86VG3 221 aa4.09□□□□□ -1.75
SPG11-222ENST00000560435 LRRTM3Q86VH5 581 aa4.09□□□□□ -1.75
SPG11-222ENST00000560435 SYNPOQ8N3V7 929 aa4.09□□□□□ -1.75
SPG11-222ENST00000560435 PMFBP1Q8TBY8 1022 aa4.09□□□□□ -1.75
SPG11-222ENST00000560435 ZNF48Q96MX3 618 aaPredicted RBP4.09□□□□□ -1.75
SPG11-222ENST00000560435 PNKPQ96T60 521 aa4.09□□□□□ -1.75
SPG11-222ENST00000560435 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.09□□□□□ -1.75
SPG11-222ENST00000560435 FBXO34Q9NWN3 711 aa4.09□□□□□ -1.75
SPG11-222ENST00000560435 TMEM260Q9NX78 707 aa4.09□□□□□ -1.75
SPG11-222ENST00000560435 HSFX1Q9UBD0 423 aa4.09□□□□□ -1.75
SPG11-222ENST00000560435 LINC01548A6NM66 108 aa4.08□□□□□ -1.76
SPG11-222ENST00000560435 GSG1L2A8MUP6 293 aa4.08□□□□□ -1.76
SPG11-222ENST00000560435 GUCY1A2P33402 732 aa4.08□□□□□ -1.76
SPG11-222ENST00000560435 ALDH1A3P47895 512 aa4.08□□□□□ -1.76
SPG11-222ENST00000560435 BROXQ5VW32 411 aa4.08□□□□□ -1.76
SPG11-222ENST00000560435 ZNF626Q68DY1 528 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms