RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 GUCY2FP51841 1108 aa11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 PURAQ00577 322 aaKnown RBP11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 CACNB2Q08289 660 aaPredicted RBP11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 NCBP1Q09161 790 aaKnown RBP11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 NAB2Q15742 525 aa11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 MNS1Q8NEH6 495 aa11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 KCNN1Q92952 543 aa11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 TSGA10Q9BZW7 698 aa11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 OSGEPQ9NPF4 335 aa11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 NUB1Q9Y5A7 615 aa11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 NRCAMQ92823 1304 aa11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 COL1A2P08123 1366 aa11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 TSPAN1O60635 241 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 PALMO75781 387 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 IGHA2P01877 340 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 STAG3L1P0CL83 205 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 CYBAP13498 195 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 GTF2H1P32780 548 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 GALCP54803 685 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 MYL6P60660 151 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 SP3Q02447 781 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 NCOA4Q13772 614 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 BMS1Q14692 1282 aaKnown RBP11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 ZNF394Q53GI3 561 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 WDR44Q5JSH3 913 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 SCARA5Q6ZMJ2 495 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 TRAPPC11Q7Z392 1133 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 ZNF710Q8N1W2 664 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 SLC30A5Q8TAD4 765 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 CD99L2Q8TCZ2 262 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 EPS8L1Q8TE68 723 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 PCDHB18PQ96TA0 734 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 AGPAT1Q99943 283 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 C1orf112Q9NSG2 853 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 SMARCAL1Q9NZC9 954 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 MYO1AQ9UBC5 1043 aa11.71□□□□□ -0.54
SNRPA1-211ENST00000560433 LACTBL1A8MY62 500 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 KIAA0391O15091 583 aaKnown RBP11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 PMM2O15305 246 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 PJA2O43164 708 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 ATMINO43313 823 aaPredicted RBP11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 GPR32O75388 356 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 NFICP08651 508 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 MCCD1P59942 119 aaPredicted RBP11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 NOP14P78316 857 aaKnown RBP11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 KIF22Q14807 665 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 C2CD6Q53TS8 623 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 ZNF662Q6ZS27 426 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 PHLDB2Q86SQ0 1253 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 VPS36Q86VN1 386 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 FAM71AQ8IYT1 594 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 C7orf31Q8N865 590 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 SHC3Q92529 594 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 SYT11Q9BT88 431 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 THAP2Q9H0W7 228 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 ADAMTS10Q9H324 1103 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 EHD2Q9NZN4 543 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 HYOU1Q9Y4L1 999 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 TACC1O75410 805 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 CFHP08603 1231 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 TMEM191BP0C7N4 346 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 CYP11B1P15538 503 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 CHRNB2P17787 502 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 CD58P19256 250 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 AMPD2Q01433 879 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 FAM47CQ5HY64 1035 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 MFSD14CQ5VZR4 134 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 ARHGEF26Q96DR7 871 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 HHIPL1Q96JK4 782 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 EIF2AQ9BY44 585 aaKnown RBP11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 RPF1Q9H9Y2 349 aaKnown RBP11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 CDC23Q9UJX2 597 aa11.7□□□□□ -0.54
SNRPA1-211ENST00000560433 RRN3P2A6NIE6 340 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 DYNC1I1O14576 645 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 PRKAR2AP13861 404 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 SCP2P22307 547 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 RFX1P22670 979 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 TEX35Q5T0J7 233 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 JADE1Q6IE81 842 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 TMEM270Q6UE05 265 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 CATSPER4Q7RTX7 472 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 ERO1AQ96HE7 468 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 NOX5Q96PH1 765 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 APOL6Q9BWW8 343 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 NFKBIZQ9BYH8 718 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 RNF216Q9NWF9 866 aaPredicted RBP11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 TSKSQ9UJT2 592 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 TRIP11Q15643 1979 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 C17orf102A2RUQ5 167 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 HAS3O00219 553 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 DUSP11O75319 330 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 NPTXRO95502 500 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 ALDH1A1P00352 501 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 MYCP01106 439 aaPredicted RBP11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 H2AFZP0C0S5 128 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 WEE2P0C1S8 567 aa11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 HOXA11P31270 313 aaPredicted RBP11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 RNASE9P60153 205 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-211ENST00000560433 ADAM17P78536 824 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms