RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 ACO2Q99798 780 aaKnown RBP15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 MRPL4Q9BYD3 311 aaKnown RBP15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 TRIM7Q9C029 511 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 NCANO14594 1321 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 DOCK3Q8IZD9 2030 aa15.13■□□□□ 0.01
CARMIL3-203ENST00000560349 FAM189A1O60320 539 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 PIGRP01833 764 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 CD58P19256 250 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 TFAMQ00059 246 aaKnown RBP15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 TMEM62Q0P6H9 643 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 ZNF568Q3ZCX4 644 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 WDR44Q5JSH3 913 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 DAB2IPQ5VWQ8 1189 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 SPRYD7Q5W111 196 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 TMEM270Q6UE05 265 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 ZBTB8OSQ8IWT0 167 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 MMGT1Q8N4V1 131 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 SHCBP1Q8NEM2 672 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 DDX1Q92499 740 aaKnown RBP15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 KRT35Q92764 455 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 ZNF653Q96CK0 615 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 ERAP1Q9NZ08 941 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 AKT3Q9Y243 479 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 NOC2LQ9Y3T9 749 aaKnown RBP15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 A0A087WZ62 844 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 PMM2O15305 246 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 TOM1L1O75674 476 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 FGFR4P22455 802 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 NOP14P78316 857 aaKnown RBP15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 CST9Q5W186 159 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 SLFN12LQ6IEE8 588 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 C2orf69Q8N8R5 385 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 USP38Q8NB14 1042 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 NPLOC4Q8TAT6 608 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 MORC4Q8TE76 937 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 ALG3Q92685 438 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 CPB2Q96IY4 423 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 FDXACB1Q9BRP7 624 aaPredicted RBP15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 DDX47Q9H0S4 455 aaKnown RBP15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 TMEM134Q9H6X4 195 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 NR2E1Q9Y466 385 aa15.12■□□□□ 0.01
CARMIL3-203ENST00000560349 PLXNB2O15031 1838 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 A0A0A6YYK5 440 aaPredicted RBP15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 IGKV6-21A0A0C4DH24 114 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 GRIN3BO60391 1043 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 C22orf31O95567 290 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 ZBTB48P10074 688 aaPredicted RBP15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 GTF2H1P32780 548 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 SLC20A2Q08357 652 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 NCOA4Q13772 614 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 SLFN11Q7Z7L1 901 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 CGRRF1Q99675 332 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 ISCUQ9H1K1 167 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 KIAA1586Q9HCI6 787 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 AMFRQ9UKV5 643 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 INTUQ9ULD6 942 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 STXBP5LQ9Y2K9 1186 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 DIS3Q9Y2L1 958 aaKnown RBP15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 HBP1O60381 514 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 TUBBP07437 444 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 SMPD1P17405 629 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 HUNKP57058 714 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 CDR2Q01850 454 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 MXD4Q14582 209 aaPredicted RBP15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 CDCA2Q69YH5 1023 aaPredicted RBP15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 ZNF572Q7Z3I7 529 aaPredicted RBP15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 IFT81Q8WYA0 676 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 MAML3Q96JK9 1138 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 PCDHB4Q9Y5E5 795 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 PLXNA1Q9UIW2 1896 aa15.11■□□□□ 0.01
CARMIL3-203ENST00000560349 ABLIM1O14639 778 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 RTN2O75298 545 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 HEXIM1O94992 359 aaKnown RBP15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 GH1P01241 217 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 CXCL8P10145 99 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 MYL6P60660 151 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 GPC5P78333 572 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 CLDN10P78369 228 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 GUCY2DQ02846 1103 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 ATF7IP2Q5U623 682 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 TCP11Q8WWU5 503 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 CCDC102AQ96A19 550 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 SCLT1Q96NL6 688 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 NUP85Q9BW27 656 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 KATNBL1Q9H079 304 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 STIM2Q9P246 746 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 ALG6Q9Y672 507 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 RAD51CO43502 376 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 FGGP02679 453 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 EFNA5P52803 228 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 GCNT1Q02742 428 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 CUL2Q13617 745 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 CCNI2Q6ZMN8 369 aaPredicted RBP15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 EFCAB13Q8IY85 973 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 RIN2Q8WYP3 895 aaPredicted RBP15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 HES6Q96HZ4 224 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 EPB41L5Q9HCM4 733 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 GJB6O95452 261 aa15.1■□□□□ 0.01
CARMIL3-203ENST00000560349 ACTN2P35609 894 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms