RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 WDR49Q8IV35 697 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 TATDN2Q93075 761 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 TANC1Q9C0D5 1861 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 RAB20Q9NX57 234 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 KLK14Q9P0G3 267 aa18.73■□□□□ 0.59
CHRNA3-206ENST00000559658 USP27XA6NNY8 438 aa18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 STX10O60499 249 aa18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 RECQL4O94761 1208 aa18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 CST3P01034 146 aaPredicted RBP18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 AXLP30530 894 aa18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 PIK3CAP42336 1068 aa18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 GLRA4Q5JXX5 417 aa18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 TOGARAM2Q6ZUX3 1019 aa18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 USP37Q86T82 979 aa18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 ZMAT2Q96NC0 199 aaKnown RBP18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 ACAP3Q96P50 834 aa18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 ARID3AQ99856 593 aa18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 DESI2Q9BSY9 194 aa18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 TRIM6Q9C030 488 aaPredicted RBP18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 APOBEC3GQ9HC16 384 aaKnown RBP18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 DNAJC12Q9UKB3 198 aa18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 IPPQ9Y573 584 aa18.72■□□□□ 0.59
CHRNA3-206ENST00000559658 ESPNB1AK53 854 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 ARID5AQ03989 594 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 NCBP1Q09161 790 aaKnown RBP18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 MEA1Q16626 185 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 TRIM60Q495X7 471 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 ZNF710Q8N1W2 664 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 KIAA1524Q8TCG1 905 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 CCDC51Q96ER9 411 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 SNX27Q96L92 541 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 KREMEN1Q96MU8 473 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 COL6A1P12109 1028 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 IBSPP21815 317 aaPredicted RBP18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 GJA8P48165 433 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 PAK2Q13177 524 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 GPNMBQ14956 572 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 ARHGAP44Q17R89 818 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 SLC39A5Q6ZMH5 540 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 TRAPPC11Q7Z392 1133 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 TET1Q8NFU7 2136 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 HELQQ8TDG4 1101 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 UBE2TQ9NPD8 197 aaPredicted RBP18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 ARHGAP20Q9P2F6 1191 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 SIX4Q9UIU6 781 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 PLAGL2Q9UPG8 496 aa18.71■□□□□ 0.59
CHRNA3-206ENST00000559658 A0A0U1RQJ8 604 aa18.7■□□□□ 0.58
CHRNA3-206ENST00000559658 F8VZ95 297 aa18.7■□□□□ 0.58
CHRNA3-206ENST00000559658 HGSNATQ68CP4 663 aa18.7■□□□□ 0.58
CHRNA3-206ENST00000559658 C1orf127Q8N9H9 656 aa18.7■□□□□ 0.58
CHRNA3-206ENST00000559658 CCDC112Q8NEF3 446 aa18.7■□□□□ 0.58
CHRNA3-206ENST00000559658 CXorf38Q8TB03 319 aa18.7■□□□□ 0.58
CHRNA3-206ENST00000559658 ATRIPQ8WXE1 791 aa18.7■□□□□ 0.58
CHRNA3-206ENST00000559658 LPPQ93052 612 aa18.7■□□□□ 0.58
CHRNA3-206ENST00000559658 CCDC94Q9BW85 323 aaPredicted RBP18.7■□□□□ 0.58
CHRNA3-206ENST00000559658 IL18RAPO95256 599 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 TMEM191BP0C7N4 346 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 AFF1P51825 1210 aaKnown RBP18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 CETN1Q12798 172 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 NCOA4Q13772 614 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 DRAP1Q14919 205 aaPredicted RBP18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 PKN2Q16513 984 aaKnown RBP18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 PPM1KQ8N3J5 372 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 C18orf25Q96B23 403 aaPredicted RBP18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 EDEM3Q9BZQ6 932 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 TUBGCP4Q9UGJ1 667 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 FBXL5Q9UKA1 691 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 PCDHB2Q9Y5E7 798 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 HNRNPH3P31942 346 aaKnown RBP18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 MYL6P60660 151 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 DSC3Q14574 896 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 LRRC8DQ7L1W4 858 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 ZNF397Q8NF99 534 aaPredicted RBP18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 LINC01599Q8WXQ3 324 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 IQCDQ96DY2 449 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 ZFP42Q96MM3 310 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 SPAG5Q96R06 1193 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 FAM105AQ9NUU6 356 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 NUB1Q9Y5A7 615 aa18.69■□□□□ 0.58
CHRNA3-206ENST00000559658 GPR182O15218 404 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 NBNO60934 754 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 CAND2O75155 1236 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 PHACTR2O75167 634 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 GFPT2O94808 682 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 RPLP2P05387 115 aaKnown RBP18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 FAAP100Q0VG06 881 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 TMEM132DQ14C87 1099 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 DUOXA2Q1HG44 320 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 TCTN1Q2MV58 587 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 SFMBT2Q5VUG0 894 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 ALKAL1Q6UXT8 129 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 ACRBPQ8NEB7 543 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 KIF12Q96FN5 646 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 PAWRQ96IZ0 340 aaKnown RBP18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 ACP6Q9NPH0 428 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 PARP2Q9UGN5 583 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 SCN1AP35498 2009 aa18.68■□□□□ 0.58
CHRNA3-206ENST00000559658 PPEF2O14830 753 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 ARHGAP6O43182 974 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 CALCAP01258 141 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms