RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 NUSAP1Q9BXS6 441 aaKnown RBP10.77□□□□□ -0.69
SMAD3-211ENST00000559460 GPR88Q9GZN0 384 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 CSRNP2Q9H175 543 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 NXF3Q9H4D5 531 aaKnown RBP10.77□□□□□ -0.69
SMAD3-211ENST00000559460 C2orf42Q9NWW7 574 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 KLK14Q9P0G3 267 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 MTRRQ9UBK8 725 aa10.77□□□□□ -0.69
SMAD3-211ENST00000559460 TDRD15B5MCY1 1934 aaKnown RBP10.76□□□□□ -0.69
SMAD3-211ENST00000559460 COL4A2P08572 1712 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 TMEM150BA6NC51 233 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 PRC1O43663 620 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 MYL4P12829 197 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 CLK2P49760 499 aaKnown RBP10.76□□□□□ -0.69
SMAD3-211ENST00000559460 ATXN3P54252 364 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-211ENST00000559460 ANTXR2P58335 489 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 GRSF1Q12849 480 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMAD3-211ENST00000559460 CCINQ13939 588 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 ZNF423Q2M1K9 1284 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 PRSS36Q5K4E3 855 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 ANKS3Q6ZW76 656 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 MICU3Q86XE3 530 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 HDDC3Q8N4P3 179 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 CHCHD4Q8N4Q1 142 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 FANCBQ8NB91 859 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 LEMD2Q8NC56 503 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 TCP11Q8WWU5 503 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 TMEM87BQ96K49 555 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 ZNF512Q96ME7 567 aaPredicted RBP10.76□□□□□ -0.69
SMAD3-211ENST00000559460 RIT2Q99578 217 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 MTA3Q9BTC8 594 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 LNPKQ9C0E8 428 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 MINDY3Q9H8M7 445 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 CYP4F11Q9HBI6 524 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 ASAH2Q9NR71 780 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 WDR81Q562E7 1941 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 ZMYM2Q9UBW7 1377 aa10.76□□□□□ -0.69
SMAD3-211ENST00000559460 DOCK6Q96HP0 2047 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 INO80B-WBP1J3KQ70 363 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 CDX4O14627 284 aaPredicted RBP10.75□□□□□ -0.69
SMAD3-211ENST00000559460 ASAP2O43150 1006 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 TRAPPC3O43617 180 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 TSPAN1O60635 241 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 DKC1O60832 514 aaKnown RBP eCLIP10.75□□□□□ -0.693e-14■■□□□ 13.6
SMAD3-211ENST00000559460 HOXC13P31276 330 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 MAPK8P45983 427 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 ARPP19P56211 112 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 LAMTOR4Q0VGL1 99 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 ARHGAP29Q52LW3 1261 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 PLA2G4FQ68DD2 849 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 TYW1BQ6NUM6 668 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 TXNDC11Q6PKC3 985 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 ZNF605Q86T29 641 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 MB21D2Q8IYB1 491 aaPredicted RBP10.75□□□□□ -0.69
SMAD3-211ENST00000559460 REXO1Q8N1G1 1221 aaKnown RBP10.75□□□□□ -0.69
SMAD3-211ENST00000559460 PRPF31Q8WWY3 499 aaKnown RBP10.75□□□□□ -0.69
SMAD3-211ENST00000559460 RUFY2Q8WXA3 655 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 HHIPQ96QV1 700 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 UBL7Q96S82 380 aaPredicted RBP10.75□□□□□ -0.69
SMAD3-211ENST00000559460 UNC45AQ9H3U1 944 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 TRPV4Q9HBA0 871 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 SCUBE2Q9NQ36 999 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 RBM28Q9NW13 759 aaKnown RBP10.75□□□□□ -0.69
SMAD3-211ENST00000559460 BARHL2Q9NY43 387 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 CACNA2D2Q9NY47 1150 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 CACNG4Q9UBN1 327 aa10.75□□□□□ -0.69
SMAD3-211ENST00000559460 ARHGEF37A1IGU5 675 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 ARNTLO00327 626 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 NPTXRO95502 500 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 THP07101 528 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 MCM5P33992 734 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 RFC5P40937 340 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 DGKEP52429 567 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 TFDP1Q14186 410 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 USP39Q53GS9 565 aaKnown RBP10.74□□□□□ -0.69
SMAD3-211ENST00000559460 SLC27A1Q6PCB7 646 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 ZNF461Q8TAF7 563 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 CCDC12Q8WUD4 166 aaPredicted RBP10.74□□□□□ -0.69
SMAD3-211ENST00000559460 EXOC4Q96A65 974 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 TMEM143Q96AN5 459 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 CEP170P1Q96L14 293 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 ZSWIM3Q96MP5 696 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 TMEM209Q96SK2 561 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 PAAF1Q9BRP4 392 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 C6orf50Q9HD87 102 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 BMP2KQ9NSY1 1161 aaPredicted RBP10.74□□□□□ -0.69
SMAD3-211ENST00000559460 GTSE1Q9NYZ3 720 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 INSL5Q9Y5Q6 135 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 BACE2Q9Y5Z0 518 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 CNTNAP5Q8WYK1 1306 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 F5P12259 2224 aa10.74□□□□□ -0.69
SMAD3-211ENST00000559460 FAM221BA6H8Z2 402 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 SH2B2O14492 632 aaPredicted RBP10.73□□□□□ -0.69
SMAD3-211ENST00000559460 DCLK1O15075 740 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 MSH4O15457 936 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 B3GAT3O94766 335 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 APBB3O95704 486 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 PRB1P04280 392 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 GJA1P17302 382 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 CCR2P41597 374 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 DHPSP49366 369 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms