RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 MSTO1Q9BUK6 570 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 C1QTNF1Q9BXJ1 281 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 EPHX3Q9H6B9 360 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 SFXN1Q9H9B4 322 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.94□□□□□ -0.98
SNX1-207ENST00000559401 FAM13BQ9NYF5 915 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 DPP7Q9UHL4 492 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 CFAP45Q9UL16 551 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 NUB1Q9Y5A7 615 aa8.94□□□□□ -0.98
SNX1-207ENST00000559401 MORC2Q9Y6X9 1032 aaPredicted RBP8.94□□□□□ -0.98
SNX1-207ENST00000559401 C2orf16Q68DN1 1984 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.93□□□□□ -0.98
SNX1-207ENST00000559401 FAM86C2PA6NEL3 165 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 I3L4J1 428 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 PODXLO00592 558 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 OGTO15294 1046 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 TRAPPC3O43617 180 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 LILRB3O75022 631 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 CLTAP09496 248 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 ALADP13716 330 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 TNFSF9P41273 254 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 BRCC3P46736 316 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 DNM1Q05193 864 aaKnown RBP8.93□□□□□ -0.98
SNX1-207ENST00000559401 BECN1Q14457 450 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 KYAT1Q16773 422 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 UPP1Q16831 310 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 ATAT1Q5SQI0 421 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 ATL3Q6DD88 541 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 ADALQ6DHV7 355 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 DCLRE1AQ6PJP8 1040 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.93□□□□□ -0.98
SNX1-207ENST00000559401 MAP4K3Q8IVH8 894 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 CCDC65Q8IXS2 484 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 SYCP3Q8IZU3 236 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 NOC3LQ8WTT2 800 aaKnown RBP8.93□□□□□ -0.98
SNX1-207ENST00000559401 SUSD6Q92537 303 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 C18orf25Q96B23 403 aaPredicted RBP8.93□□□□□ -0.98
SNX1-207ENST00000559401 KIF12Q96FN5 646 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 DDX27Q96GQ7 796 aaKnown RBP8.93□□□□□ -0.98
SNX1-207ENST00000559401 ZMAT2Q96NC0 199 aaKnown RBP8.93□□□□□ -0.98
SNX1-207ENST00000559401 NECTIN4Q96NY8 510 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 LRRC27Q9C0I9 530 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 HAPLN2Q9GZV7 340 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 S1PR5Q9H228 398 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 ADAM7Q9H2U9 754 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 POMKQ9H5K3 350 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 RPF1Q9H9Y2 349 aaKnown RBP8.93□□□□□ -0.98
SNX1-207ENST00000559401 PIDD1Q9HB75 910 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 RXFP1Q9HBX9 757 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 CHST7Q9NS84 486 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 PANK4Q9NVE7 773 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 CNTN3Q9P232 1028 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 SEL1LQ9UBV2 794 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 TUBGCP4Q9UGJ1 667 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 EXOC7Q9UPT5 735 aa8.93□□□□□ -0.98
SNX1-207ENST00000559401 A0A0C4DFX4 3053 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 MTCL1Q9Y4B5 1905 aaKnown RBP8.92□□□□□ -0.98
SNX1-207ENST00000559401 DENND4AQ7Z401 1863 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 C19orf67A6NJJ6 358 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 TISP43B9A030 160 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 ANKRD63C9JTQ0 380 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 TMEM189-UBE2V1I3L0A0 370 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 POLR2DO15514 142 aaKnown RBP8.92□□□□□ -0.98
SNX1-207ENST00000559401 TGM5O43548 720 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 XPOTO43592 962 aaKnown RBP8.92□□□□□ -0.98
SNX1-207ENST00000559401 DCXO43602 365 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 EFEMP2O95967 443 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 PIGRP01833 764 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 KCNE1P15382 129 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 TKTP29401 623 aaKnown RBP8.92□□□□□ -0.98
SNX1-207ENST00000559401 MCM4P33991 863 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 ACOT2P49753 483 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 ASIC1P78348 528 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 KRT85P78386 507 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 GTF2BQ00403 316 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 AMPD3Q01432 767 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 SLC10A6Q3KNW5 377 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 XKR4Q5GH76 650 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 ZBTB41Q5SVQ8 909 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 LIN9Q5TKA1 542 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 SLFN12LQ6IEE8 588 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 SLC39A4Q6P5W5 647 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 PDXDC1Q6P996 788 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 SHC4Q6S5L8 630 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 ALKAL1Q6UXT8 129 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 ZNF720Q7Z2F6 126 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 RNF135Q8IUD6 432 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 IQUBQ8NA54 791 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 C3orf58Q8NDZ4 430 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 PIK3R5Q8WYR1 880 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 POMGNT1Q8WZA1 660 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 HVCN1Q96D96 273 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 DNAJC19Q96DA6 116 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 SPATA32Q96LK8 384 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 ACCSQ96QU6 501 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 FIZ1Q96SL8 496 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 TNMDQ9H2S6 317 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 IKZF4Q9H2S9 585 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 CUEDC2Q9H467 287 aa8.92□□□□□ -0.98
SNX1-207ENST00000559401 PLEKHA5Q9HAU0 1116 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms