RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 RWDD3Q9Y3V2 267 aa12.46□□□□□ -0.41
SNX1-204ENST00000559061 PLXNA3P51805 1871 aa12.46□□□□□ -0.42
SNX1-204ENST00000559061 CSPG5O95196 566 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 THP07101 528 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 MATR3P43243 847 aaKnown RBP eCLIP12.45□□□□□ -0.42
SNX1-204ENST00000559061 RNASELQ05823 741 aaKnown RBP12.45□□□□□ -0.42
SNX1-204ENST00000559061 UPP1Q16831 310 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 COBLL1Q53SF7 1204 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 SPOUT1Q5T280 376 aaKnown RBP12.45□□□□□ -0.42
SNX1-204ENST00000559061 ZNF658Q5TYW1 1059 aaPredicted RBP12.45□□□□□ -0.42
SNX1-204ENST00000559061 ISM2Q6H9L7 571 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 JADE1Q6IE81 842 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 SLFN12LQ6IEE8 588 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 ARMCX5Q6P1M9 558 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 SYCP3Q8IZU3 236 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 GUF1Q8N442 669 aaKnown RBP12.45□□□□□ -0.42
SNX1-204ENST00000559061 SMARCE1Q969G3 411 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 MRPL38Q96DV4 380 aaKnown RBP12.45□□□□□ -0.42
SNX1-204ENST00000559061 GBP4Q96PP9 640 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 MED15Q96RN5 788 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 RPS6KC1Q96S38 1066 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 GPR62Q9BZJ7 368 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 PLEKHA5Q9HAU0 1116 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 SPG21Q9NZD8 308 aa12.45□□□□□ -0.42
SNX1-204ENST00000559061 PPP1R3GB7ZBB8 358 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 EXTL3O43909 919 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 FOSL2P15408 326 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 CASP4P49662 377 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 CLCNKBP51801 687 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 STXBP4Q6ZWJ1 553 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 APBB1IPQ7Z5R6 666 aaPredicted RBP12.44□□□□□ -0.42
SNX1-204ENST00000559061 ZC3H3Q8IXZ2 948 aaKnown RBP12.44□□□□□ -0.42
SNX1-204ENST00000559061 ADSSL1Q8N142 457 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 GPD1LQ8N335 351 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 HASPINQ8TF76 798 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 B3GALT6Q96L58 329 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 ZBP1Q9H171 429 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 RPF1Q9H9Y2 349 aaKnown RBP12.44□□□□□ -0.42
SNX1-204ENST00000559061 TOPORSQ9NS56 1045 aaPredicted RBP12.44□□□□□ -0.42
SNX1-204ENST00000559061 TRAF3IP3Q9Y228 551 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 LZTS1Q9Y250 596 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 STXBP5LQ9Y2K9 1186 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 PCDHB12Q9Y5F1 795 aa12.44□□□□□ -0.42
SNX1-204ENST00000559061 TRIM49BA6NDI0 452 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 HIDE1A8MVS5 230 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 TMEM189-UBE2V1I3L0A0 370 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 BIN1O00499 593 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 PDXKO00764 312 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 LILRB3O75022 631 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 NR3C1P04150 777 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 LRPAP1P30533 357 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 MCM4P33991 863 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 GTF2F1P35269 517 aaKnown RBP eCLIP12.43□□□□□ -0.42
SNX1-204ENST00000559061 OR1G1P47890 313 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 CYP2J2P51589 502 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 YARSP54577 528 aaKnown RBP12.43□□□□□ -0.42
SNX1-204ENST00000559061 POU5F1Q01860 360 aaKnown RBP12.43□□□□□ -0.42
SNX1-204ENST00000559061 PPP2R3AQ06190 1150 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 HSP90AA2PQ14568 343 aaPredicted RBP12.43□□□□□ -0.42
SNX1-204ENST00000559061 COL19A1Q14993 1142 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 NFIL3Q16649 462 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 KYAT1Q16773 422 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 C1orf220Q5T0J3 134 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 SPATA1Q5VX52 437 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 RBM43Q6ZSC3 357 aaKnown RBP12.43□□□□□ -0.42
SNX1-204ENST00000559061 DDX53Q86TM3 631 aaKnown RBP12.43□□□□□ -0.42
SNX1-204ENST00000559061 SLC9A9Q8IVB4 645 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 VN1R2Q8NFZ6 395 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 AUTS2Q8WXX7 1259 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 KIF12Q96FN5 646 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 PDE11AQ9HCR9 933 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 AAASQ9NRG9 546 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 KIAA1468Q9P260 1216 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 FAN1Q9Y2M0 1017 aa12.43□□□□□ -0.42
SNX1-204ENST00000559061 BRWD1Q9NSI6 2320 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 ANO9A1A5B4 782 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 I3L4J1 428 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 SPTLC1O15269 473 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 SMC2O95347 1197 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 ALDH2P05091 517 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 IGFBP4P22692 258 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 PPM1AP35813 382 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 BRCC3P46736 316 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 ALDH7A1P49419 539 aaKnown RBP12.42□□□□□ -0.42
SNX1-204ENST00000559061 SNRPFP62306 86 aaKnown RBP12.42□□□□□ -0.42
SNX1-204ENST00000559061 RBM10P98175 930 aaKnown RBP12.42□□□□□ -0.42
SNX1-204ENST00000559061 UBE3AQ05086 875 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 CYP24A1Q07973 514 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 SNRNP35Q16560 246 aaKnown RBP12.42□□□□□ -0.42
SNX1-204ENST00000559061 TCEAL5Q5H9L2 206 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 LMBRD2Q68DH5 695 aaPredicted RBP12.42□□□□□ -0.42
SNX1-204ENST00000559061 CENPPQ6IPU0 288 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 FUT10Q6P4F1 479 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 OR5B17Q8NGF7 314 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 FEZF2Q8TBJ5 459 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 ZNF516Q92618 1163 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 BORCS6Q96GS4 357 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 MFSD14AQ96MC6 490 aa12.42□□□□□ -0.42
SNX1-204ENST00000559061 FAM193BQ96PV7 902 aaPredicted RBP12.42□□□□□ -0.42
SNX1-204ENST00000559061 HERC2P3Q9BVR0 1158 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms