RNA–Protein interactions for RNA: ENST00000558968.1

CTDSPL2-205, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-205ENST00000558968 VWA3AA6NCI4 1184 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 H3BQV1 296 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 TMEM189-UBE2V1I3L0A0 370 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 PI15O43692 258 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 C8AP07357 584 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 FGFR3P22607 806 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 TKTP29401 623 aaKnown RBP11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 OR1D2P34982 312 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 GRM5P41594 1212 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 BRCC3P46736 316 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 YARSP54577 528 aaKnown RBP11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 ATP2C1P98194 919 aaPredicted RBP11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 ELAVL2Q12926 359 aaKnown RBP11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 UPP1Q16831 310 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 RILPL1Q5EBL4 403 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 PPM1LQ5SGD2 360 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 LIN9Q5TKA1 542 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 DCLRE1AQ6PJP8 1040 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 RSPO2Q6UXX9 243 aaPredicted RBP11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 APBB1IPQ7Z5R6 666 aaPredicted RBP11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 ZMAT2Q96NC0 199 aaKnown RBP11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 CCDC94Q9BW85 323 aaPredicted RBP11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 CA14Q9ULX7 337 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 POLIQ9UNA4 740 aa11.34□□□□□ -0.59
CTDSPL2-205ENST00000558968 COL4A3Q01955 1670 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 TCHHQ07283 1943 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 NPHP3-ACAD11A0A0J9YXS1 232 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 KRBA1A5PL33 1030 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 ABLIM1O14639 778 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 LAMP2P13473 410 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 PROZP22891 400 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 FSHRP23945 695 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 CLCN5P51795 746 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 NUBP1P53384 320 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 SEZ6Q53EL9 994 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 AXDND1Q5T1B0 1012 aaPredicted RBP11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 PDXDC1Q6P996 788 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 MPZL3Q6UWV2 235 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 ALKAL1Q6UXT8 129 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 TMEM130Q8N3G9 435 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 SLC44A3Q8N4M1 653 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 SLC7A14Q8TBB6 771 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 DDX27Q96GQ7 796 aaKnown RBP11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 CDK5RAP3Q96JB5 506 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 SNX27Q96L92 541 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 UROC1Q96N76 676 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 ACAP3Q96P50 834 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 TCHPQ9BT92 498 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 TOPORSQ9NS56 1045 aaPredicted RBP11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 HCFC1R1Q9NWW0 138 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 ANKFY1Q9P2R3 1169 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 MTRRQ9UBK8 725 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 CDY1Q9Y6F8 540 aa11.33□□□□□ -0.6
CTDSPL2-205ENST00000558968 STK25O00506 426 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 PODXLO00592 558 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 MEFVO15553 781 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 HNRNPA1P09651 372 aaKnown RBP eCLIP11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 PLA2G4BP0C869 781 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 MCF2P10911 925 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 PLS3P13797 630 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 AOC1P19801 751 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 GUCY2CP25092 1073 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 SLC12A3P55017 1021 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 HTR4Q13639 388 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 RAB33AQ14088 237 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 XKR4Q5GH76 650 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 HYIQ5T013 277 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 SYT2Q8N9I0 419 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 ITFG1Q8TB96 612 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 GPR152Q8TDT2 470 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 FGF14Q92915 247 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 C18orf25Q96B23 403 aaPredicted RBP11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 RPP25Q9BUL9 199 aaKnown RBP11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 TIPINQ9BVW5 301 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 IRF2BPLQ9H1B7 796 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 SMC3Q9UQE7 1217 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 RBM19Q9Y4C8 960 aaKnown RBP11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 NUMBLQ9Y6R0 609 aa11.32□□□□□ -0.6
CTDSPL2-205ENST00000558968 SCN1AP35498 2009 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 FANCMQ8IYD8 2048 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 ANHXE9PGG2 379 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 TRAPPC3O43617 180 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 GFRA3O60609 400 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 XYLBO75191 536 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 MAPTP10636 758 aaKnown RBP11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 SRFP11831 508 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 RFX1P22670 979 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 STRN3Q13033 797 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 DHX8Q14562 1220 aaKnown RBP11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 NOLC1Q14978 699 aaKnown RBP eCLIP11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 TMEM119Q4V9L6 283 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 VARS2Q5ST30 1063 aaKnown RBP11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 PARM1Q6UWI2 310 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 ANKS3Q6ZW76 656 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 TMEM161BQ8NDZ6 487 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 LRRC15Q8TF66 581 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 SPIRE2Q8WWL2 714 aa11.31□□□□□ -0.6
CTDSPL2-205ENST00000558968 ING5Q8WYH8 240 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms