RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 AP3M2P53677 418 aa6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 CACNB3P54284 484 aa6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 RNASE9P60153 205 aaKnown RBP6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 CCDC15Q0P6D6 951 aa6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 IKQ13123 557 aaPredicted RBP6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 PSMD6Q15008 389 aa6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 SNRNP35Q16560 246 aaKnown RBP6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 MIGA2Q7L4E1 593 aa6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 PHF13Q86YI8 300 aaPredicted RBP6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 KATNAL2Q8IYT4 538 aa6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 ZDHHC14Q8IZN3 488 aa6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 UBR7Q8N806 425 aa6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 GBP7Q8N8V2 638 aaPredicted RBP6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 BANK1Q8NDB2 785 aa6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 ZNF564Q8TBZ8 553 aaPredicted RBP6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 SLC20A1Q8WUM9 679 aa6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 ANKRD27Q96NW4 1050 aa6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 NT5C1BQ96P26 610 aa6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 NSRP1Q9H0G5 558 aaKnown RBP6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 EFR3BQ9Y2G0 817 aa6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 NR2E1Q9Y466 385 aa6.9□□□□□ -1.3
AC087516.2-201ENST00000558963 PTPRFP10586 1907 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 CTNND1O60716 968 aaKnown RBP6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 CHN1P15882 459 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 RPS12P25398 132 aaKnown RBP6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 ICAM3P32942 547 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 SKIV2L2P42285 1042 aaKnown RBP6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 COPS2P61201 443 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 DLG4P78352 724 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 SPP2Q13103 211 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 NR1H3Q13133 447 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 MTMR1Q13613 665 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 DLGAP5Q15398 846 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 TTC27Q6P3X3 843 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 CCDC137Q6PK04 289 aaKnown RBP6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 PAXIP1Q6ZW49 1069 aaPredicted RBP6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 OTUD6AQ7L8S5 288 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 REPS2Q8NFH8 660 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 NOD2Q9HC29 1040 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 POLD4Q9HCU8 107 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 SSU72Q9NP77 194 aaKnown RBP6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 UBN1Q9NPG3 1134 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 PXMP2Q9NR77 195 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 CTTNBP2NLQ9P2B4 639 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 ZNF112Q9UJU3 913 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 CCPG1Q9ULG6 757 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 PCDHB2Q9Y5E7 798 aa6.9□□□□□ -1.31
AC087516.2-201ENST00000558963 ANK1P16157 1881 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 CAPN15O75808 1086 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 DGAT1O75907 488 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 FAM155BO75949 473 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 ATG7O95352 703 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 ECEL1O95672 775 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 MMEP08473 750 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 TSHRP16473 764 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 DNA2P51530 1060 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 CCNG1P51959 295 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 C1QBPQ07021 282 aaKnown RBP6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 MCL1Q07820 350 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 ACVR2BQ13705 512 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 CCNG2Q16589 344 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 EAPPQ56P03 285 aaPredicted RBP6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 MSL1Q68DK7 614 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 MON1BQ7L1V2 547 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 NIPA2Q8N8Q9 360 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 ZNF784Q8NCA9 323 aaPredicted RBP6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 FBXO25Q8TCJ0 367 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 N4BP2L2Q92802 583 aaPredicted RBP6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 ATP6V0A1Q93050 837 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 FAM212AQ96EL1 285 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 PDCD2LQ9BRP1 358 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 CBWD1Q9BRT8 395 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 TRIM51Q9BSJ1 452 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 CELF4Q9BZC1 486 aaKnown RBP6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 CENPHQ9H3R5 247 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 GOLPH3Q9H4A6 298 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 RAB20Q9NX57 234 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 SMAPO00193 183 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 LIN7AO14910 233 aaPredicted RBP6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 THAP12O43422 761 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 EXTL3O43909 919 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 CDH5P33151 784 aaPredicted RBP6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 ZNF132P52740 706 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 RBM5P52756 815 aaKnown RBP eCLIP6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 TAP1Q03518 808 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 DMP1Q13316 513 aaPredicted RBP6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 MKRN4PQ13434 485 aaPredicted RBP6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 ZACNQ401N2 412 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 PLEKHA7Q6IQ23 1121 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 SLC39A4Q6P5W5 647 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 TRPM8Q7Z2W7 1104 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 VSIG10LQ86VR7 867 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 GPD1LQ8N335 351 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 CCDC63Q8NA47 563 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 KRT35Q92764 455 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 GRAMD1AQ96CP6 724 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 DDX27Q96GQ7 796 aaKnown RBP6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 SNF8Q96H20 258 aa6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 L3MBTL3Q96JM7 780 aaPredicted RBP6.89□□□□□ -1.31
AC087516.2-201ENST00000558963 NUP85Q9BW27 656 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms