RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 CBWD1Q9BRT8 395 aa13.82□□□□□ -0.2
RABGGTA-207ENST00000558936 HERC2P3Q9BVR0 1158 aa13.82□□□□□ -0.2
RABGGTA-207ENST00000558936 TLE6Q9H808 572 aa13.82□□□□□ -0.2
RABGGTA-207ENST00000558936 PUF60Q9UHX1 559 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-207ENST00000558936 HCFC2Q9Y5Z7 792 aa13.82□□□□□ -0.2
RABGGTA-207ENST00000558936 DENND4AQ7Z401 1863 aa13.82□□□□□ -0.2
RABGGTA-207ENST00000558936 CLDN3O15551 220 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 MBTPS2O43462 519 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 NCK2O43639 380 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 GADD45BO75293 160 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 TBCAO75347 108 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 IDEP14735 1019 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 RPL17P18621 184 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 TXLNAP40222 546 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 ACOT2P49753 483 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 DSG1Q02413 1049 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 KRT17Q04695 432 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 STRN3Q13033 797 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 STK4Q13043 487 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 HSP90AA2PQ14568 343 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 PRSS55Q6UWB4 352 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 EFCAB13Q8IY85 973 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 IQUBQ8NA54 791 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 LNX1Q8TBB1 728 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 MICAL1Q8TDZ2 1067 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 ADAMTS19Q8TE59 1207 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 ACAP3Q96P50 834 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 MRPL44Q9H9J2 332 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 RXFP1Q9HBX9 757 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 ENTPD7Q9NQZ7 604 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 ADAM28Q9UKQ2 775 aa13.81□□□□□ -0.2
RABGGTA-207ENST00000558936 A0A1W2PQ27 194 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 A0A1W2PQ64 194 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 A0A1W2PQD8 194 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 HNRNPDLO14979 420 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 OGTO15294 1046 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 TEX28O15482 410 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 NFICP08651 508 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 SLFN14P0C7P3 912 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 GAP43P17677 238 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 BECN1Q14457 450 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 TMEM132AQ24JP5 1023 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 TPRNQ4KMQ1 711 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 PDE12Q6L8Q7 609 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 LLGL2Q6P1M3 1020 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 UNC13DQ70J99 1090 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 FMR1NBQ8N0W7 255 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 C12orf76Q8N812 135 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 SMRP1Q8NCR6 262 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 ZNF507Q8TCN5 953 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 SUSD6Q92537 303 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 CLSTN3Q9BQT9 956 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 TCHPQ9BT92 498 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 CUEDC2Q9H467 287 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 NGRNQ9NPE2 291 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 SEL1LQ9UBV2 794 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 PTPRJQ12913 1337 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 NCOR1O75376 2440 aa13.8□□□□□ -0.2
RABGGTA-207ENST00000558936 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 CARNS1A5YM72 827 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 TMEM189-UBE2V1I3L0A0 370 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 C2CD2LO14523 706 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 SPTLC1O15269 473 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 TBC1D4O60343 1298 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 GCNT3O95395 438 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 LIG4P49917 911 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 CLCN4P51793 760 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 DPYDQ12882 1025 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 SMC1AQ14683 1233 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 LILRA6Q6PI73 481 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 EP400NLQ6ZTU2 488 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 HACE1Q8IYU2 909 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 FSIP1Q8NA03 581 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 PPP2R3CQ969Q6 453 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 SAAL1Q96ER3 474 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 BORCS6Q96GS4 357 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 FAM193BQ96PV7 902 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 RPS6KC1Q96S38 1066 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 APOL5Q9BWW9 433 aa13.79□□□□□ -0.2
RABGGTA-207ENST00000558936 GOLGA8IPA6NC78 632 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 GOLGA8JA6NMD2 632 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 CLTAP09496 248 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 WEE2P0C1S8 567 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 FGFR3P22607 806 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 TKTP29401 623 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 ASIC1P78348 528 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 KMT5BQ4FZB7 885 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 JADE1Q6IE81 842 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 PTCRAQ6ISU1 281 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 ANKRD54Q6NXT1 300 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 POTEHQ6S545 545 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 KRBA2Q6ZNG9 492 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 PLEKHO2Q8TD55 490 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 ERCC4Q92889 916 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 HVCN1Q96D96 273 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 MSTO1Q9BUK6 570 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 CCDC94Q9BW85 323 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 COLEC11Q9BWP8 271 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 PCIF1Q9H4Z3 704 aa13.78□□□□□ -0.2
RABGGTA-207ENST00000558936 SLC39A2Q9NP94 309 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms