RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 ACSF2Q96CM8 615 aaPredicted RBP12.94□□□□□ -0.34
SEC11A-206ENST00000558924 TMEM237Q96Q45 408 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 ZNRF3Q9ULT6 936 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 RPS6KL1Q9Y6S9 549 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 CCDC188H7C350 402 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 CNGA1P29973 690 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 ATP11AP98196 1134 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 SLC30A9Q6PML9 568 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 ZNF365Q70YC5 407 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 NT5DC3Q86UY8 548 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 FAM160B2Q86V87 743 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 C4orf33Q8N1A6 199 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 FBF1Q8TES7 1133 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 NUP85Q9BW27 656 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 DEFB129Q9H1M3 183 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 PAPOLBQ9NRJ5 636 aaKnown RBP12.94□□□□□ -0.34
SEC11A-206ENST00000558924 ANAPC7Q9UJX3 599 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 MYH11P35749 1972 aa12.94□□□□□ -0.34
SEC11A-206ENST00000558924 KIAA1551Q9HCM1 1747 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 KLRG2A4D1S0 409 aaPredicted RBP12.93□□□□□ -0.34
SEC11A-206ENST00000558924 CSDE1O75534 798 aaKnown RBP12.93□□□□□ -0.34
SEC11A-206ENST00000558924 KRT19P08727 400 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 CTNNA2P26232 953 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 RPL21P46778 160 aaKnown RBP12.93□□□□□ -0.34
SEC11A-206ENST00000558924 PDE6CP51160 858 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 HYIQ5T013 277 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 STYK1Q6J9G0 422 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 SYTL5Q8TDW5 730 aaPredicted RBP12.93□□□□□ -0.34
SEC11A-206ENST00000558924 RFFLQ8WZ73 363 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 SLC5A4Q9NY91 659 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 PI4K2BG5E9Z4 385 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 KRT16P08779 473 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 ATP4AP20648 1035 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 DYNLT1P63172 113 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 ANKRD20A2Q5SQ80 823 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 ANKRD20A1Q5TYW2 823 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 ANKRD20A3Q5VUR7 823 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 TAOK1Q7L7X3 1001 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 LONP2Q86WA8 852 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 NCAPG2Q86XI2 1143 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 IFT74Q96LB3 600 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 NT5C1BQ96P26 610 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 C11orf70Q9BRQ4 267 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 TRIM7Q9C029 511 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 HOMER3Q9NSC5 361 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 KLHL14Q9P2G3 628 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 PLIN4Q96Q06 1357 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 PDE4DIPQ5VU43 2346 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 DRP2Q13474 957 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 TAF11Q15544 211 aa12.93□□□□□ -0.34
SEC11A-206ENST00000558924 RNF25Q96BH1 459 aaPredicted RBP12.93□□□□□ -0.34
SEC11A-206ENST00000558924 L3MBTL3Q96JM7 780 aaPredicted RBP12.93□□□□□ -0.34
SEC11A-206ENST00000558924 NAP1L3Q99457 506 aaPredicted RBP12.93□□□□□ -0.34
SEC11A-206ENST00000558924 SUN1O94901 812 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 NR3C2P08235 984 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 VIL1P09327 827 aaKnown RBP12.92□□□□□ -0.34
SEC11A-206ENST00000558924 VCAM1P19320 739 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 POLE2P56282 527 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 MRPS9P82933 396 aaKnown RBP12.92□□□□□ -0.34
SEC11A-206ENST00000558924 MKRN3Q13064 507 aaKnown RBP12.92□□□□□ -0.34
SEC11A-206ENST00000558924 DNAJC3Q13217 504 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 MCF2L2Q86YR7 1114 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 RTKN2Q8IZC4 609 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 DAW1Q8N136 415 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 ZBTB45Q96K62 511 aaPredicted RBP12.92□□□□□ -0.34
SEC11A-206ENST00000558924 TGS1Q96RS0 853 aaKnown RBP12.92□□□□□ -0.34
SEC11A-206ENST00000558924 TSC22D3Q99576 134 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 EPAS1Q99814 870 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 NOP53Q9NZM5 478 aaKnown RBP12.92□□□□□ -0.34
SEC11A-206ENST00000558924 LMCD1Q9NZU5 365 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 ADRB2P07550 413 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 CD19P15391 556 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 PAPOLAP51003 745 aaKnown RBP12.92□□□□□ -0.34
SEC11A-206ENST00000558924 SCNN1BP51168 640 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 LAMB3Q13751 1172 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 WDR44Q5JSH3 913 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 PPP1R15BQ5SWA1 713 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 C10orf76Q5T2E6 689 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 SLC5A5Q92911 643 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 TMEM165Q9HC07 324 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 SIX2Q9NPC8 291 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 OLFML3Q9NRN5 406 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 CNOT7Q9UIV1 285 aaKnown RBP12.92□□□□□ -0.34
SEC11A-206ENST00000558924 TARSP26639 723 aaKnown RBP12.92□□□□□ -0.34
SEC11A-206ENST00000558924 NOVP48745 357 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 TMEM270Q6UE05 265 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 ZNF564Q8TBZ8 553 aaPredicted RBP12.92□□□□□ -0.34
SEC11A-206ENST00000558924 MAGEC3Q8TD91 643 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 DTX3LQ8TDB6 740 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 PPP1R13LQ8WUF5 828 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 HACL1Q9UJ83 578 aa12.92□□□□□ -0.34
SEC11A-206ENST00000558924 WDR64B1ANS9 1081 aa12.91□□□□□ -0.34
SEC11A-206ENST00000558924 PYGMP11217 842 aa12.91□□□□□ -0.34
SEC11A-206ENST00000558924 MAPK4P31152 587 aa12.91□□□□□ -0.34
SEC11A-206ENST00000558924 CIITAP33076 1130 aa12.91□□□□□ -0.34
SEC11A-206ENST00000558924 PIK3CAP42336 1068 aa12.91□□□□□ -0.34
SEC11A-206ENST00000558924 GMPSP49915 693 aaPredicted RBP12.91□□□□□ -0.34
SEC11A-206ENST00000558924 STRN3Q13033 797 aa12.91□□□□□ -0.34
SEC11A-206ENST00000558924 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
SEC11A-206ENST00000558924 RNF220Q5VTB9 566 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms