RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 WDFY3Q8IZQ1 3526 aa10.88□□□□□ -0.67
SPG11-212ENST00000558790 A0A0U1RQF3 1178 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.87□□□□□ -0.67
SPG11-212ENST00000558790 WDR64B1ANS9 1081 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 NT5C1B-RDH14C9J2C7 533 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 ZC3H11AO75152 810 aaKnown RBP eCLIP10.87□□□□□ -0.67
SPG11-212ENST00000558790 CSDE1O75534 798 aaKnown RBP10.87□□□□□ -0.67
SPG11-212ENST00000558790 SASH3O75995 380 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 PCSK2P16519 638 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 TMOD1P28289 359 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 GMPRP36959 345 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 RCAN1P53805 252 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 BCAR1P56945 870 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 DRP2Q13474 957 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 PUM1Q14671 1186 aaKnown RBP eCLIP10.87□□□□□ -0.67
SPG11-212ENST00000558790 KIAA1841Q6NSI8 718 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 KANK3Q6NY19 840 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 DHX32Q7L7V1 743 aaKnown RBP10.87□□□□□ -0.67
SPG11-212ENST00000558790 C12orf76Q8N812 135 aaPredicted RBP10.87□□□□□ -0.67
SPG11-212ENST00000558790 TDRD5Q8NAT2 981 aaKnown RBP10.87□□□□□ -0.67
SPG11-212ENST00000558790 AUTS2Q8WXX7 1259 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 MRPL9Q9BYD2 267 aaKnown RBP10.87□□□□□ -0.67
SPG11-212ENST00000558790 ZBP1Q9H171 429 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 DLL3Q9NYJ7 618 aa10.87□□□□□ -0.67
SPG11-212ENST00000558790 NAP1L2Q9ULW6 460 aaPredicted RBP10.87□□□□□ -0.67
SPG11-212ENST00000558790 FLNBO75369 2602 aaKnown RBP10.86□□□□□ -0.67
SPG11-212ENST00000558790 MSH4O15457 936 aa10.86□□□□□ -0.67
SPG11-212ENST00000558790 CHMP2AO43633 222 aa10.86□□□□□ -0.67
SPG11-212ENST00000558790 EPCAMP16422 314 aa10.86□□□□□ -0.67
SPG11-212ENST00000558790 TARSP26639 723 aaKnown RBP10.86□□□□□ -0.67
SPG11-212ENST00000558790 CIITAP33076 1130 aa10.86□□□□□ -0.67
SPG11-212ENST00000558790 MTHFRP42898 656 aa10.86□□□□□ -0.67
SPG11-212ENST00000558790 CCINQ13939 588 aa10.86□□□□□ -0.67
SPG11-212ENST00000558790 VPS52Q8N1B4 723 aa10.86□□□□□ -0.67
SPG11-212ENST00000558790 BCL7CQ8WUZ0 217 aaPredicted RBP10.86□□□□□ -0.67
SPG11-212ENST00000558790 LPPQ93052 612 aa10.86□□□□□ -0.67
SPG11-212ENST00000558790 BHMTQ93088 406 aa10.86□□□□□ -0.67
SPG11-212ENST00000558790 GJA10Q969M2 543 aa10.86□□□□□ -0.67
SPG11-212ENST00000558790 TMEM169Q96HH4 297 aa10.86□□□□□ -0.67
SPG11-212ENST00000558790 DISC1Q9NRI5 854 aa10.86□□□□□ -0.67
SPG11-212ENST00000558790 DZANK1Q9NVP4 752 aa10.86□□□□□ -0.67
SPG11-212ENST00000558790 CACNA1IQ9P0X4 2223 aa10.86□□□□□ -0.67
SPG11-212ENST00000558790 DSPP15924 2871 aaKnown RBP10.86□□□□□ -0.67
SPG11-212ENST00000558790 TMEM150BA6NC51 233 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 MEIS3P2A8K0S8 358 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 EDIL3O43854 480 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 EOMESO95936 686 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 CPA1P15085 419 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 NFKB1P19838 968 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 ALDH7A1P49419 539 aaKnown RBP10.85□□□□□ -0.67
SPG11-212ENST00000558790 TBC1D8BQ0IIM8 1120 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 LONRF3Q496Y0 759 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 CWF19L1Q69YN2 538 aaKnown RBP10.85□□□□□ -0.67
SPG11-212ENST00000558790 SKAP1Q86WV1 359 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 DCLK2Q8N568 766 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 CCDC12Q8WUD4 166 aaPredicted RBP10.85□□□□□ -0.67
SPG11-212ENST00000558790 PHKBQ93100 1093 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 VN1R3Q9BXE9 311 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 UNC45AQ9H3U1 944 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 C6orf50Q9HD87 102 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 DACT1Q9NYF0 836 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 DBR1Q9UK59 544 aaKnown RBP10.85□□□□□ -0.67
SPG11-212ENST00000558790 PATJQ8NI35 1801 aa10.85□□□□□ -0.67
SPG11-212ENST00000558790 B4GALT3O60512 393 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 GAS7O60861 476 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 CXCL14O95715 111 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 CTSAP10619 480 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 JAK3P52333 1124 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 TARBP2Q15633 366 aaKnown RBP10.84□□□□□ -0.67
SPG11-212ENST00000558790 RSPO4Q2I0M5 234 aaPredicted RBP10.84□□□□□ -0.67
SPG11-212ENST00000558790 MTERF2Q49AM1 385 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 LRCH2Q5VUJ6 765 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 MCTP2Q6DN12 878 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 ZDHHC14Q8IZN3 488 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 SLC22A17Q8WUG5 538 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 SLC5A5Q92911 643 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 IGSF21Q96ID5 467 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 PNMA5Q96PV4 448 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 SH2D3AQ9BRG2 576 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 MFSD1Q9H3U5 465 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 TBC1D13Q9NVG8 400 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 ZFATQ9P243 1243 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 DNAJB4Q9UDY4 337 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 PIN4Q9Y237 131 aaKnown RBP10.84□□□□□ -0.67
SPG11-212ENST00000558790 INPP5FQ9Y2H2 1132 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 IRAK3Q9Y616 596 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 TRIP11Q15643 1979 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 ASH1LQ9NR48 2969 aaKnown RBP10.84□□□□□ -0.67
SPG11-212ENST00000558790 VWA8A3KMH1 1905 aa10.84□□□□□ -0.67
SPG11-212ENST00000558790 A0A087WZ62 844 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 CCDC196A0A1B0GTZ2 297 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 SFPQP23246 707 aaKnown RBP eCLIP10.83□□□□□ -0.68
SPG11-212ENST00000558790 GNA11P29992 359 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 SFNP31947 248 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 POLGP54098 1239 aaPredicted RBP10.83□□□□□ -0.68
SPG11-212ENST00000558790 PCBP4P57723 403 aaKnown RBP10.83□□□□□ -0.68
SPG11-212ENST00000558790 FGD1P98174 961 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 KRT32Q14532 448 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 PTPN14Q15678 1187 aa10.83□□□□□ -0.68
SPG11-212ENST00000558790 BMP2KLQ5H9B9 411 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms