RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 SCARA3Q6AZY7 606 aa13.97□□□□□ -0.17
SMAD3-207ENST00000558763 TSHZ1Q6ZSZ6 1077 aa13.97□□□□□ -0.17
SMAD3-207ENST00000558763 USP37Q86T82 979 aa13.97□□□□□ -0.17
SMAD3-207ENST00000558763 BRSK2Q8IWQ3 736 aa13.97□□□□□ -0.17
SMAD3-207ENST00000558763 ZBTB8OSQ8IWT0 167 aa13.97□□□□□ -0.17
SMAD3-207ENST00000558763 C7orf31Q8N865 590 aa13.97□□□□□ -0.17
SMAD3-207ENST00000558763 SLC20A1Q8WUM9 679 aa13.97□□□□□ -0.17
SMAD3-207ENST00000558763 LMBR1Q8WVP7 490 aa13.97□□□□□ -0.17
SMAD3-207ENST00000558763 TATDN2Q93075 761 aa13.97□□□□□ -0.17
SMAD3-207ENST00000558763 VTI1AQ96AJ9 217 aa13.97□□□□□ -0.17
SMAD3-207ENST00000558763 NLRP4Q96MN2 994 aa13.97□□□□□ -0.17
SMAD3-207ENST00000558763 C2orf40Q9H1Z8 148 aa13.97□□□□□ -0.17
SMAD3-207ENST00000558763 NOCTQ9UK39 431 aaKnown RBP13.97□□□□□ -0.17
SMAD3-207ENST00000558763 PCDHGC5Q9Y5F6 944 aa13.97□□□□□ -0.17
SMAD3-207ENST00000558763 SCN10AQ9Y5Y9 1956 aa13.97□□□□□ -0.17
SMAD3-207ENST00000558763 MKI67P46013 3256 aaKnown RBP13.97□□□□□ -0.17
SMAD3-207ENST00000558763 KBTBD13C9JR72 458 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 CLDN3O15551 220 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 BUB1O43683 1085 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 TACC1O75410 805 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 POU5F1BQ06416 359 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 NBPF20Q3BBV1 942 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 EEF1DP3Q658K8 133 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 SRGAP1Q7Z6B7 1085 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 TXLNBQ8N3L3 684 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 METTL13Q8N6R0 699 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 MNS1Q8NEH6 495 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 OR5B17Q8NGF7 314 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 EPS8L1Q8TE68 723 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 U2AF1L4Q8WU68 220 aaKnown RBP13.96□□□□□ -0.17
SMAD3-207ENST00000558763 CGRRF1Q99675 332 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 PI4K2AQ9BTU6 479 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 JRKLQ9Y4A0 524 aa13.96□□□□□ -0.17
SMAD3-207ENST00000558763 TRIP12Q14669 1992 aaPredicted RBP13.96□□□□□ -0.18
SMAD3-207ENST00000558763 A0A1W2PQ45 241 aaPredicted RBP13.96□□□□□ -0.18
SMAD3-207ENST00000558763 A0A1W2PQY0 241 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 MOXD2PA6NHM9 499 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 MAGEB2O15479 319 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 ASAP2O43150 1006 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 SRGAP2O75044 1071 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 CHRNB2P17787 502 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 HIC1Q14526 733 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 WHAMMP3Q1A5X7 153 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 MTHFD1LQ6UB35 978 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 FMNL3Q8IVF7 1028 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 PPM1KQ8N3J5 372 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 GLT1D1Q96MS3 346 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 NT5C1BQ96P26 610 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 NOX5Q96PH1 765 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 TLR10Q9BXR5 811 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 ACP6Q9NPH0 428 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 LUC7LQ9NQ29 371 aaKnown RBP13.96□□□□□ -0.18
SMAD3-207ENST00000558763 TAS2R14Q9NYV8 317 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 CPSF3Q9UKF6 684 aaKnown RBP13.96□□□□□ -0.18
SMAD3-207ENST00000558763 OGDHLQ9ULD0 1010 aa13.96□□□□□ -0.18
SMAD3-207ENST00000558763 NRCAMQ92823 1304 aa13.95□□□□□ -0.18
SMAD3-207ENST00000558763 GRID2IPA4D2P6 1211 aa13.95□□□□□ -0.18
SMAD3-207ENST00000558763 DNM1LO00429 736 aa13.95□□□□□ -0.18
SMAD3-207ENST00000558763 OGTO15294 1046 aa13.95□□□□□ -0.18
SMAD3-207ENST00000558763 ZC3H11AO75152 810 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMAD3-207ENST00000558763 HLA-DRAP01903 254 aa13.95□□□□□ -0.18
SMAD3-207ENST00000558763 ZSCAN20P17040 1043 aaPredicted RBP13.95□□□□□ -0.18
SMAD3-207ENST00000558763 GCNT1Q02742 428 aa13.95□□□□□ -0.18
SMAD3-207ENST00000558763 TFDP1Q14186 410 aa13.95□□□□□ -0.18
SMAD3-207ENST00000558763 FAM187BQ17R55 369 aa13.95□□□□□ -0.18
SMAD3-207ENST00000558763 NOP9Q86U38 636 aaKnown RBP13.95□□□□□ -0.18
SMAD3-207ENST00000558763 DHX38Q92620 1227 aaKnown RBP13.95□□□□□ -0.18
SMAD3-207ENST00000558763 ARID3AQ99856 593 aa13.95□□□□□ -0.18
SMAD3-207ENST00000558763 TSEN34Q9BSV6 310 aaKnown RBP13.95□□□□□ -0.18
SMAD3-207ENST00000558763 INTUQ9ULD6 942 aa13.95□□□□□ -0.18
SMAD3-207ENST00000558763 SNX12Q9UMY4 172 aa13.95□□□□□ -0.18
SMAD3-207ENST00000558763 SAR1BQ9Y6B6 198 aa13.95□□□□□ -0.18
SMAD3-207ENST00000558763 PDE2AO00408 941 aaPredicted RBP13.94□□□□□ -0.18
SMAD3-207ENST00000558763 MEFVO15553 781 aaPredicted RBP13.94□□□□□ -0.18
SMAD3-207ENST00000558763 SGPL1O95470 568 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 HARSP12081 509 aaKnown RBP13.94□□□□□ -0.18
SMAD3-207ENST00000558763 TNNI1P19237 187 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 ZNF200P98182 395 aaPredicted RBP13.94□□□□□ -0.18
SMAD3-207ENST00000558763 MPZL3Q6UWV2 235 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 ZBTB33Q86T24 672 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 VPS36Q86VN1 386 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 CEP120Q8N960 986 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 LRRC57Q8N9N7 239 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 FNBP1Q96RU3 617 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 AGPAT1Q99943 283 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 APOBEC3GQ9HC16 384 aaKnown RBP13.94□□□□□ -0.18
SMAD3-207ENST00000558763 STARD7Q9NQZ5 370 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 PUF60Q9UHX1 559 aaKnown RBP13.94□□□□□ -0.18
SMAD3-207ENST00000558763 NCANO14594 1321 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 GRIN2DO15399 1336 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 A0A087WZ62 844 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 C17orf102A2RUQ5 167 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 INO80B-WBP1J3KQ70 363 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 PALMO75781 387 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 VTNP04004 478 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 CCDC172P0C7W6 258 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 GALCP54803 685 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 MFAP3P55082 362 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 ITGA7Q13683 1181 aa13.94□□□□□ -0.18
SMAD3-207ENST00000558763 ATF7IP2Q5U623 682 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms