RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 IL16Q14005 1332 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 RAD50Q92878 1312 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 K7ESF4 209 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 NRP1O14786 923 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 LTA4HP09960 611 aaKnown RBP3.81□□□□□ -1.8
HERC1-203ENST00000558532 HIBADHP31937 336 aaKnown RBP3.81□□□□□ -1.8
HERC1-203ENST00000558532 CASRP41180 1078 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 GPR3P46089 330 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 NPEPPSP55786 919 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 WNT3AP56704 352 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 SCAND1P57086 179 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 MRPS9P82933 396 aaKnown RBP3.81□□□□□ -1.8
HERC1-203ENST00000558532 MEF2AQ02078 507 aaPredicted RBP3.81□□□□□ -1.8
HERC1-203ENST00000558532 RABEP1Q15276 862 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 UBE3CQ15386 1083 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 ELAVL1Q15717 326 aaKnown RBP3.81□□□□□ -1.8
HERC1-203ENST00000558532 FAM214AQ32MH5 1076 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 FKBP15Q5T1M5 1219 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 ZKSCAN2Q63HK3 967 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 CRIP3Q6Q6R5 217 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 Q6ZRM9 215 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 SGMS1Q86VZ5 419 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 DDX42Q86XP3 938 aaKnown RBP eCLIP3.81□□□□□ -1.8
HERC1-203ENST00000558532 Q8N1X5 172 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 PDCL2Q8N4E4 241 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 GPT2Q8TD30 523 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 MIEF2Q96C03 454 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 AHCYL2Q96HN2 611 aaKnown RBP3.81□□□□□ -1.8
HERC1-203ENST00000558532 RAX2Q96IS3 184 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 ZNF512Q96ME7 567 aaPredicted RBP3.81□□□□□ -1.8
HERC1-203ENST00000558532 ZNF830Q96NB3 372 aaPredicted RBP3.81□□□□□ -1.8
HERC1-203ENST00000558532 ZNF747Q9BV97 191 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 TRIM8Q9BZR9 551 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 QRSL1Q9H0R6 528 aaKnown RBP3.81□□□□□ -1.8
HERC1-203ENST00000558532 TSPYL1Q9H0U9 437 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 YY1AP1Q9H869 796 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 CCM2LQ9NUG4 571 aaPredicted RBP3.81□□□□□ -1.8
HERC1-203ENST00000558532 OGFRQ9NZT2 677 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 SCOCQ9UIL1 159 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 AK9Q5TCS8 1911 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 KNDC1Q76NI1 1749 aa3.81□□□□□ -1.8
HERC1-203ENST00000558532 GLI2P10070 1586 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 EFCAB6Q5THR3 1501 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 FANCAO15360 1455 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 CD109Q6YHK3 1445 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 NSD2O96028 1365 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 KLRG2A4D1S0 409 aaPredicted RBP3.8□□□□□ -1.8
HERC1-203ENST00000558532 GOLGA8AA7E2F4 631 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 PRAMEF4O60810 478 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 CTSSP25774 331 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 SCNN1GP51170 649 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 RABGGTBP53611 331 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 CDK17Q00537 523 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 SRSF2Q01130 221 aaKnown RBP3.8□□□□□ -1.8
HERC1-203ENST00000558532 AMPD3Q01432 767 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 HHEXQ03014 270 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 FAPQ12884 760 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 RRP1BQ14684 758 aaKnown RBP3.8□□□□□ -1.8
HERC1-203ENST00000558532 MUM1Q2TAK8 710 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 TOR2AQ5JU69 321 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 MIIPQ5JXC2 388 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 MFSD5Q6N075 450 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 CAVIN1Q6NZI2 390 aaKnown RBP3.8□□□□□ -1.8
HERC1-203ENST00000558532 HTR3DQ70Z44 454 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 C1orf210Q8IVY1 113 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 FTSJ3Q8IY81 847 aaKnown RBP3.8□□□□□ -1.8
HERC1-203ENST00000558532 ELOA2Q8IYF1 753 aaPredicted RBP3.8□□□□□ -1.8
HERC1-203ENST00000558532 ANKRD35Q8N283 1001 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 GLB1L3Q8NCI6 653 aaPredicted RBP3.8□□□□□ -1.8
HERC1-203ENST00000558532 ATL2Q8NHH9 583 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 CACTINQ8WUQ7 758 aaKnown RBP3.8□□□□□ -1.8
HERC1-203ENST00000558532 SNX33Q8WV41 574 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 AUTS2Q8WXX7 1259 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 RUNDC1Q96C34 613 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 ZNF503Q96F45 646 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 CHMP4BQ9H444 224 aaKnown RBP3.8□□□□□ -1.8
HERC1-203ENST00000558532 DIAPH3Q9NSV4 1193 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 ZBTB40Q9NUA8 1239 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 CEP72Q9P209 647 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 USP25Q9UHP3 1055 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 CTNNA3Q9UI47 895 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 MCM8Q9UJA3 840 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 TNNQ9UQP3 1299 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 ATP8A1Q9Y2Q0 1164 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 GIT1Q9Y2X7 761 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 MORC2Q9Y6X9 1032 aaPredicted RBP3.8□□□□□ -1.8
HERC1-203ENST00000558532 ZCCHC11Q5TAX3 1644 aaKnown RBP3.8□□□□□ -1.8
HERC1-203ENST00000558532 FRMPD1Q5SYB0 1578 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 SYCP2Q9BX26 1530 aa3.8□□□□□ -1.8
HERC1-203ENST00000558532 PLCH2O75038 1416 aa3.79□□□□□ -1.8
HERC1-203ENST00000558532 KIF24Q5T7B8 1368 aa3.79□□□□□ -1.8
HERC1-203ENST00000558532 QRICH2Q9H0J4 1663 aa3.79□□□□□ -1.8
HERC1-203ENST00000558532 CYP27B1O15528 508 aa3.79□□□□□ -1.8
HERC1-203ENST00000558532 HOXA3O43365 443 aaPredicted RBP3.79□□□□□ -1.8
HERC1-203ENST00000558532 AMHP03971 560 aa3.79□□□□□ -1.8
HERC1-203ENST00000558532 TPM3P06753 285 aa3.79□□□□□ -1.8
HERC1-203ENST00000558532 C1SP09871 688 aa3.79□□□□□ -1.8
HERC1-203ENST00000558532 C6P13671 934 aa3.79□□□□□ -1.8
HERC1-203ENST00000558532 TRIM27P14373 513 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms