RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 KCNG1Q9UIX4 513 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 ODF2LQ9ULJ1 636 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 USTQ9Y2C2 406 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 DENND4AQ7Z401 1863 aa13.04□□□□□ -0.32
HERC1-202ENST00000558324 H0YCG3 227 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 TMEM189-UBE2V1I3L0A0 370 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 PODXLO00592 558 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 HNRNPDLO14979 420 aaKnown RBP13.03□□□□□ -0.32
HERC1-202ENST00000558324 CLDN3O15551 220 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 MEFVO15553 781 aaPredicted RBP13.03□□□□□ -0.32
HERC1-202ENST00000558324 PDGFBP01127 241 aaPredicted RBP13.03□□□□□ -0.32
HERC1-202ENST00000558324 CXCL8P10145 99 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 TKTP29401 623 aaKnown RBP13.03□□□□□ -0.32
HERC1-202ENST00000558324 GBP2P32456 591 aaPredicted RBP13.03□□□□□ -0.32
HERC1-202ENST00000558324 LIG4P49917 911 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 NCKAP1LP55160 1127 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 SPAG1Q07617 926 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 XKR4Q5GH76 650 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 LIN9Q5TKA1 542 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 LILRA6Q6PI73 481 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 ALKAL1Q6UXT8 129 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 ZPBP2Q6X784 338 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 GPR65Q8IYL9 337 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 TMEM130Q8N3G9 435 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 LARP4BQ92615 738 aaKnown RBP13.03□□□□□ -0.32
HERC1-202ENST00000558324 ZNF707Q96C28 371 aaPredicted RBP13.03□□□□□ -0.32
HERC1-202ENST00000558324 ASIC4Q96FT7 647 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 CLIC6Q96NY7 704 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 HAPLN2Q9GZV7 340 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 PARVGQ9HBI0 331 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 WDR6Q9NNW5 1121 aaKnown RBP13.03□□□□□ -0.32
HERC1-202ENST00000558324 CNTN3Q9P232 1028 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 FBXO2Q9UK22 296 aaPredicted RBP13.03□□□□□ -0.32
HERC1-202ENST00000558324 FBXW11Q9UKB1 542 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 MTMR6Q9Y217 621 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 CLUHO75153 1309 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 C2orf16Q68DN1 1984 aa13.03□□□□□ -0.32
HERC1-202ENST00000558324 TRAPPC3O43617 180 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 TRAK2O60296 914 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 N4BP1O75113 896 aaKnown RBP13.02□□□□□ -0.33
HERC1-202ENST00000558324 FGFR3P22607 806 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 OR1D2P34982 312 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 MCL1Q07820 350 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 SLC10A6Q3KNW5 377 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 PDXDC1Q6P996 788 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 CD300LGQ6UXG3 332 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 GET4Q7L5D6 327 aaPredicted RBP13.02□□□□□ -0.33
HERC1-202ENST00000558324 DYMQ7RTS9 669 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 BMP8AQ7Z5Y6 402 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 FBXL6Q8N531 539 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 HDAC7Q8WUI4 952 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 DDX27Q96GQ7 796 aaKnown RBP13.02□□□□□ -0.33
HERC1-202ENST00000558324 INTS4Q96HW7 963 aaKnown RBP13.02□□□□□ -0.33
HERC1-202ENST00000558324 USP28Q96RU2 1077 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 CCSER1Q9C0I3 900 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 ZDHHC7Q9NXF8 308 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 DAXXQ9UER7 740 aaPredicted RBP13.02□□□□□ -0.33
HERC1-202ENST00000558324 TUBGCP4Q9UGJ1 667 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 TBX20Q9UMR3 447 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 POLIQ9UNA4 740 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 NUB1Q9Y5A7 615 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 CDY1Q9Y6F8 540 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 TECTAO75443 2155 aa13.02□□□□□ -0.33
HERC1-202ENST00000558324 CCL16O15467 120 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 STX6O43752 255 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 ZMYND10O75800 440 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 C8AP07357 584 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 KCNE1P15382 129 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 NMT1P30419 496 aaKnown RBP13.01□□□□□ -0.33
HERC1-202ENST00000558324 TXLNAP40222 546 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 TNFSF9P41273 254 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 ZNF131P52739 623 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 VCPP55072 806 aaKnown RBP13.01□□□□□ -0.33
HERC1-202ENST00000558324 PPM1LQ5SGD2 360 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 ZBTB41Q5SVQ8 909 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 RSPO2Q6UXX9 243 aaPredicted RBP13.01□□□□□ -0.33
HERC1-202ENST00000558324 UBALD2Q8IYN6 164 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 KRI1Q8N9T8 703 aaKnown RBP13.01□□□□□ -0.33
HERC1-202ENST00000558324 SLC7A14Q8TBB6 771 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 STAMQ92783 540 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 PRKD2Q9BZL6 878 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 MTRRQ9UBK8 725 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 CCDC39Q9UFE4 941 aa13.01□□□□□ -0.33
HERC1-202ENST00000558324 ARIH1Q9Y4X5 557 aaPredicted RBP13.01□□□□□ -0.33
HERC1-202ENST00000558324 SRPRBQ9Y5M8 271 aaKnown RBP13.01□□□□□ -0.33
HERC1-202ENST00000558324 MYH11P35749 1972 aa13□□□□□ -0.33
HERC1-202ENST00000558324 CLTAP09496 248 aa13□□□□□ -0.33
HERC1-202ENST00000558324 MCM4P33991 863 aa13□□□□□ -0.33
HERC1-202ENST00000558324 DDIT3P35638 169 aa13□□□□□ -0.33
HERC1-202ENST00000558324 ARPP19P56211 112 aa13□□□□□ -0.33
HERC1-202ENST00000558324 NTHL1P78549 312 aa13□□□□□ -0.33
HERC1-202ENST00000558324 PPP2R3AQ06190 1150 aa13□□□□□ -0.33
HERC1-202ENST00000558324 RAB33AQ14088 237 aa13□□□□□ -0.33
HERC1-202ENST00000558324 ZC2HC1CQ53FD0 456 aaPredicted RBP13□□□□□ -0.33
HERC1-202ENST00000558324 VARS2Q5ST30 1063 aaKnown RBP13□□□□□ -0.33
HERC1-202ENST00000558324 IER5LQ5T953 404 aa13□□□□□ -0.33
HERC1-202ENST00000558324 FOXD4L5Q5VV16 416 aaPredicted RBP13□□□□□ -0.33
HERC1-202ENST00000558324 RRAGBQ5VZM2 374 aa13□□□□□ -0.33
HERC1-202ENST00000558324 CYP26C1Q6V0L0 522 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms