RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 RNF169Q8NCN4 708 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 LINC01599Q8WXQ3 324 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 ZBTB45Q96K62 511 aaPredicted RBP13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 ACO2Q99798 780 aaKnown RBP13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 FTHL17Q9BXU8 183 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 ST6GALNAC4Q9H4F1 302 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 CHST12Q9NRB3 414 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 TMEM63CQ9P1W3 806 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 ANKFY1Q9P2R3 1169 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 EXOC7Q9UPT5 735 aa13.15□□□□□ -0.3
HMGB1P8-201ENST00000558211 CNTNAP2Q9UHC6 1331 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 ABHD14A-ACY1A0A1B0GW23 586 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 FIGNL2A6NMB9 653 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 TISP43B9A030 160 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 ANKRD63C9JTQ0 380 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 HNRNPDLO14979 420 aaKnown RBP13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 N4BP3O15049 544 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 NPTXRO95502 500 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 ABCD1P33897 745 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 KCNJ6P48051 423 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 ALCAMQ13740 583 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 DSC3Q14574 896 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 SHHQ15465 462 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 ZNF658Q5TYW1 1059 aaPredicted RBP13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 FAM117BQ6P1L5 589 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 EPM2AIP1Q7L775 607 aaPredicted RBP13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 MAP4K3Q8IVH8 894 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 MYOCDQ8IZQ8 938 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 SPATA20Q8TB22 786 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 ZNF507Q8TCN5 953 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 SCFD1Q8WVM8 642 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 SYAP1Q96A49 352 aaPredicted RBP13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 HVCN1Q96D96 273 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 GDF15Q99988 308 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 ADPGKQ9BRR6 497 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 APOL6Q9BWW8 343 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 STRA6Q9BX79 667 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 EIF2AQ9BY44 585 aaKnown RBP13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 TRIM6Q9C030 488 aaPredicted RBP13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 PDZD7Q9H5P4 517 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 RGS18Q9NS28 235 aa13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 CXXC1Q9P0U4 656 aaPredicted RBP13.14□□□□□ -0.31
HMGB1P8-201ENST00000558211 A0A1B0GUA9 196 aa13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 EIF3DO15371 548 aaKnown RBP eCLIP13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 SCP2P22307 547 aa13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 WDR5P61964 334 aaKnown RBP13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 DEFB103AP81534 67 aa13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 SKOR2Q2VWA4 1001 aaPredicted RBP13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 ZNF568Q3ZCX4 644 aa13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 UBXN11Q5T124 520 aa13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 SLC27A1Q6PCB7 646 aa13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 TMCO2Q7Z6W1 182 aaPredicted RBP13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 NOC3LQ8WTT2 800 aaKnown RBP13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 HERVK_113Q902F9 699 aa13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 RNPC3Q96LT9 517 aaKnown RBP13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 MTIF3Q9H2K0 278 aaKnown RBP13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 TMEM206Q9H813 350 aa13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 LRFN2Q9ULH4 789 aa13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 TNFSF13BQ9Y275 285 aa13.13□□□□□ -0.31
HMGB1P8-201ENST00000558211 C9IYK1 514 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 CLIC2O15247 247 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 CLDN3O15551 220 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 EFCAB14O75071 495 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 BAIAP3O94812 1187 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 AMHP03971 560 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 HOXD13P35453 343 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 PRCPP42785 496 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 OSTNP61366 133 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 MORC3Q14149 939 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 SEZ6Q53EL9 994 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 KLHL10Q6JEL2 608 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 SLC39A4Q6P5W5 647 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 MPZL3Q6UWV2 235 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 ZPBP2Q6X784 338 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 SLC24A5Q71RS6 500 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 ECHDC2Q86YB7 292 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 THNSL1Q8IYQ7 743 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 TPCN2Q8NHX9 752 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 POMGNT1Q8WZA1 660 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 LPPQ93052 612 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 PCIF1Q9H4Z3 704 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 C1orf112Q9NSG2 853 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 FAM105AQ9NUU6 356 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 ZNF358Q9NW07 568 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 HES2Q9Y543 173 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 PCDHB7Q9Y5E2 793 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 PCDHB2Q9Y5E7 798 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 SLC4A7Q9Y6M7 1214 aa13.12□□□□□ -0.31
HMGB1P8-201ENST00000558211 A0A0U1RQF3 1178 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 TOM1L1O75674 476 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 KIF20AO95235 890 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 PIGRP01833 764 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 BMP6P22004 513 aa13.11□□□□□ -0.31
HMGB1P8-201ENST00000558211 STIM1Q13586 685 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms