RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 PRPF6O94906 941 aaKnown RBP7.62□□□□□ -1.19
RTF1-204ENST00000558117 APOL3O95236 402 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 CNOT4O95628 575 aaKnown RBP7.62□□□□□ -1.19
RTF1-204ENST00000558117 LSP1P33241 339 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 ANTXR2P58335 489 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 PHC1P78364 1004 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 SPATS1Q496A3 300 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 LCE1DQ5T752 114 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 RNF187Q5TA31 235 aaPredicted RBP7.62□□□□□ -1.19
RTF1-204ENST00000558117 TIGD7Q6NT04 549 aaPredicted RBP7.62□□□□□ -1.19
RTF1-204ENST00000558117 LARP4Q71RC2 724 aaKnown RBP eCLIP7.62□□□□□ -1.19
RTF1-204ENST00000558117 LIMS2Q7Z4I7 341 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 PRRT2Q7Z6L0 340 aaPredicted RBP7.62□□□□□ -1.19
RTF1-204ENST00000558117 CIR1Q86X95 450 aaPredicted RBP7.62□□□□□ -1.19
RTF1-204ENST00000558117 ZNF610Q8N9Z0 462 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 SLC5A5Q92911 643 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 LMF1Q96S06 567 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 KIAA1683Q9H0B3 1180 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 SEC61A2Q9H9S3 476 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 PPP4R1LQ9P1A2 415 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 MSRAQ9UJ68 235 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 FAM184BQ9ULE4 1060 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 NR2E3Q9Y5X4 410 aa7.62□□□□□ -1.19
RTF1-204ENST00000558117 MAFGO15525 162 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 PHKG2P15735 406 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 STAT5BP51692 787 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 RAC3P60763 192 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 STAT4Q14765 748 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 PCOLCEQ15113 449 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 SLC4A8Q2Y0W8 1093 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 KANSL1Q7Z3B3 1105 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 UBE2Q1Q7Z7E8 422 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 FAM177A1Q8N128 213 aaPredicted RBP7.61□□□□□ -1.19
RTF1-204ENST00000558117 CHST13Q8NET6 341 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 LRRC37BQ96QE4 947 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 RBM15Q96T37 977 aaKnown RBP eCLIP7.61□□□□□ -1.19
RTF1-204ENST00000558117 PSMD1Q99460 953 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 P2RX7Q99572 595 aaKnown RBP7.61□□□□□ -1.19
RTF1-204ENST00000558117 NR2E1Q9Y466 385 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 ARFGEF2Q9Y6D5 1785 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 MRC1P22897 1456 aa7.61□□□□□ -1.19
RTF1-204ENST00000558117 ADCY2Q08462 1091 aa7.6□□□□□ -1.19
RTF1-204ENST00000558117 ZBTB41Q5SVQ8 909 aa7.6□□□□□ -1.19
RTF1-204ENST00000558117 AGBL4Q5VU57 503 aa7.6□□□□□ -1.19
RTF1-204ENST00000558117 CLRN3Q8NCR9 226 aa7.6□□□□□ -1.19
RTF1-204ENST00000558117 NEIL1Q96FI4 390 aaPredicted RBP7.6□□□□□ -1.19
RTF1-204ENST00000558117 SAMD11Q96NU1 681 aa7.6□□□□□ -1.19
RTF1-204ENST00000558117 TMX1Q9H3N1 280 aa7.6□□□□□ -1.19
RTF1-204ENST00000558117 SMPD4Q9NXE4 827 aa7.6□□□□□ -1.19
RTF1-204ENST00000558117 SAE1Q9UBE0 346 aaPredicted RBP7.6□□□□□ -1.19
RTF1-204ENST00000558117 EVC2Q86UK5 1308 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.59□□□□□ -1.19
RTF1-204ENST00000558117 ARHGAP6O43182 974 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 BRINP1O60477 761 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 GMPSP49915 693 aaPredicted RBP7.59□□□□□ -1.19
RTF1-204ENST00000558117 MRE11P49959 708 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 BCAR1P56945 870 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 TMPRSS15P98073 1019 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 DGKDQ16760 1214 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 TBC1D9BQ66K14 1250 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 TRIM68Q6AZZ1 485 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 USP30Q70CQ3 517 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 HDGFL2Q7Z4V5 671 aaPredicted RBP7.59□□□□□ -1.19
RTF1-204ENST00000558117 DDX42Q86XP3 938 aaKnown RBP eCLIP7.59□□□□□ -1.19
RTF1-204ENST00000558117 GIMAP8Q8ND71 665 aaPredicted RBP7.59□□□□□ -1.19
RTF1-204ENST00000558117 OR5AN1Q8NGI8 311 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 GDF15Q99988 308 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 MEGF9Q9H1U4 602 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 OR10A2Q9H208 303 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 VTA1Q9NP79 307 aa7.59□□□□□ -1.19
RTF1-204ENST00000558117 APOBEC2Q9Y235 224 aaKnown RBP7.59□□□□□ -1.19
RTF1-204ENST00000558117 NOC2LQ9Y3T9 749 aaKnown RBP7.59□□□□□ -1.19
RTF1-204ENST00000558117 RTL1A6NKG5 1358 aa7.59□□□□□ -1.2
RTF1-204ENST00000558117 COL15A1P39059 1388 aa7.59□□□□□ -1.2
RTF1-204ENST00000558117 CHD8Q9HCK8 2581 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 ERVV-2B6SEH9 535 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 ADM5C9JUS6 153 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 RAB11FIP3O75154 756 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 BUD31P41223 144 aaPredicted RBP7.58□□□□□ -1.2
RTF1-204ENST00000558117 SESN2P58004 480 aaPredicted RBP7.58□□□□□ -1.2
RTF1-204ENST00000558117 AMPD3Q01432 767 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 EFEMP1Q12805 493 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 PDCD1Q15116 288 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 RNF151Q2KHN1 245 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 FAM109BQ6ICB4 259 aaPredicted RBP7.58□□□□□ -1.2
RTF1-204ENST00000558117 KIAA1841Q6NSI8 718 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 FRMD7Q6ZUT3 714 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 RASSF3Q86WH2 238 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 TTC9BQ8N6N2 239 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 ATL2Q8NHH9 583 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 WDR66Q8TBY9 1149 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 PTPN18Q99952 460 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 HTATIP2Q9BUP3 242 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 ANO3Q9BYT9 981 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 C12orf65Q9H3J6 166 aaKnown RBP7.58□□□□□ -1.2
RTF1-204ENST00000558117 TOPORSQ9NS56 1045 aaPredicted RBP7.58□□□□□ -1.2
RTF1-204ENST00000558117 KCMF1Q9P0J7 381 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 PUF60Q9UHX1 559 aaKnown RBP7.58□□□□□ -1.2
RTF1-204ENST00000558117 ZNF609O15014 1411 aa7.58□□□□□ -1.2
RTF1-204ENST00000558117 ST20-MTHFSA0A0A6YYL1 179 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms