RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 XKR4Q5GH76 650 aa17.31■□□□□ 0.36
TUBB3-214ENST00000557490 L1TD1Q5T7N2 865 aaKnown RBP17.31■□□□□ 0.36
TUBB3-214ENST00000557490 CNNM4Q6P4Q7 775 aa17.31■□□□□ 0.36
TUBB3-214ENST00000557490 ALKAL1Q6UXT8 129 aa17.31■□□□□ 0.36
TUBB3-214ENST00000557490 RABGGTAQ92696 567 aa17.31■□□□□ 0.36
TUBB3-214ENST00000557490 PPP1R10Q96QC0 940 aaKnown RBP17.31■□□□□ 0.36
TUBB3-214ENST00000557490 HERC2P3Q9BVR0 1158 aa17.31■□□□□ 0.36
TUBB3-214ENST00000557490 USP25Q9UHP3 1055 aa17.31■□□□□ 0.36
TUBB3-214ENST00000557490 SERTAD1Q9UHV2 236 aa17.31■□□□□ 0.36
TUBB3-214ENST00000557490 ADAM28Q9UKQ2 775 aa17.31■□□□□ 0.36
TUBB3-214ENST00000557490 SSX2IPQ9Y2D8 614 aa17.31■□□□□ 0.36
TUBB3-214ENST00000557490 KMT2EQ8IZD2 1858 aa17.31■□□□□ 0.36
TUBB3-214ENST00000557490 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.3■□□□□ 0.36
TUBB3-214ENST00000557490 A0A0B4J269 797 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 A0A1W2PQ27 194 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 A0A1W2PQ64 194 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 A0A1W2PQD8 194 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 OGTO15294 1046 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 SOD2P04179 222 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 MYBP10242 640 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 KCNE1P15382 129 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 ANP32AP39687 249 aaKnown RBP17.3■□□□□ 0.36
TUBB3-214ENST00000557490 AFMP43652 599 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 NAB2Q15742 525 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 TPRNQ4KMQ1 711 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 KIAA1841Q6NSI8 718 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 FUT10Q6P4F1 479 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 SLC39A4Q6P5W5 647 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 ADHFE1Q8IWW8 467 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 SYCP3Q8IZU3 236 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 AUTS2Q8WXX7 1259 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 UROC1Q96N76 676 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 STRA6Q9BX79 667 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 HAPLN2Q9GZV7 340 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 PLEKHA5Q9HAU0 1116 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 GDPD2Q9HCC8 539 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 MRPL17Q9NRX2 175 aaKnown RBP17.3■□□□□ 0.36
TUBB3-214ENST00000557490 CNTN3Q9P232 1028 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 CACNG4Q9UBN1 327 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 MUTYHQ9UIF7 546 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 IRAK3Q9Y616 596 aa17.3■□□□□ 0.36
TUBB3-214ENST00000557490 ANKRD63C9JTQ0 380 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 F8W810 466 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 ACTN4O43707 911 aaKnown RBP17.29■□□□□ 0.36
TUBB3-214ENST00000557490 CXCL8P10145 99 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 LTBRP36941 435 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 SYKP43405 635 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 PPP2R3AQ06190 1150 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 POSTNQ15063 836 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 PTPN14Q15678 1187 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 SLC10A6Q3KNW5 377 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 UNC13DQ70J99 1090 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 FSIP1Q8NA03 581 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 DDX27Q96GQ7 796 aaKnown RBP17.29■□□□□ 0.36
TUBB3-214ENST00000557490 PAAF1Q9BRP4 392 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 EMILIN2Q9BXX0 1053 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 BLZF1Q9H2G9 400 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 TMEM206Q9H813 350 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 RPF1Q9H9Y2 349 aaKnown RBP17.29■□□□□ 0.36
TUBB3-214ENST00000557490 FAM86C1Q9NVL1 165 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 FAM50BQ9Y247 325 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 HPSEQ9Y251 543 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 EPG5Q9HCE0 2579 aa17.29■□□□□ 0.36
TUBB3-214ENST00000557490 SF3B1O75533 1304 aaKnown RBP eCLIP17.28■□□□□ 0.363e-6■■■■■ 137.9
TUBB3-214ENST00000557490 C2CD2LO14523 706 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 CLASP2O75122 1294 aaKnown RBP17.28■□□□□ 0.36
TUBB3-214ENST00000557490 TBX10O75333 385 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 PRPF6O94906 941 aaKnown RBP17.28■□□□□ 0.36
TUBB3-214ENST00000557490 KIF4AO95239 1232 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 GLUD2P49448 558 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 CASP5P51878 434 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 DLX2Q07687 328 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-214ENST00000557490 ELAVL2Q12926 359 aaKnown RBP17.28■□□□□ 0.36
TUBB3-214ENST00000557490 USP41Q3LFD5 358 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 FAM26FQ5R3K3 315 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 LLGL2Q6P1M3 1020 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 DCLRE1AQ6PJP8 1040 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 TAS1R1Q7RTX1 841 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 HASPINQ8TF76 798 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 POMGNT1Q8WZA1 660 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 PAGE5Q96GU1 130 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 ZMAT2Q96NC0 199 aaKnown RBP17.28■□□□□ 0.36
TUBB3-214ENST00000557490 PRRX2Q99811 253 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 CD207Q9UJ71 328 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 AGO2Q9UKV8 859 aaKnown RBP17.28■□□□□ 0.36
TUBB3-214ENST00000557490 CIZ1Q9ULV3 898 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-214ENST00000557490 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.28■□□□□ 0.36
TUBB3-214ENST00000557490 STYXL1Q9Y6J8 313 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 GVINP1Q7Z2Y8 2422 aa17.28■□□□□ 0.36
TUBB3-214ENST00000557490 FAM237AA0A1B0GTK4 181 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 PVALEFA0A1B0GWK0 134 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 GOLGA6L4A6NEF3 574 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 TISP43B9A030 160 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 B3GAT3O94766 335 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 GLP2RO95838 553 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 EFEMP2O95967 443 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 TNFSF9P41273 254 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 NDUFA8P51970 172 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 DSG1Q02413 1049 aa17.27■□□□□ 0.36
TUBB3-214ENST00000557490 KCNA1Q09470 495 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms