RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 GJB7Q6PEY0 223 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 ADAT2Q7Z6V5 191 aaKnown RBP13.39□□□□□ -0.27
APEX1-216ENST00000557159 SDCCAG8Q86SQ7 713 aaPredicted RBP13.39□□□□□ -0.27
APEX1-216ENST00000557159 VSIG1Q86XK7 387 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 TDRPQ86YL5 185 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 MTMR14Q8NCE2 650 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 BBOF1Q8ND07 529 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 COA7Q96BR5 231 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 SNF8Q96H20 258 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 ZNF333Q96JL9 665 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 SYT15Q9BQS2 421 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 CCDC77Q9BR77 488 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 REEP2Q9BRK0 252 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 TUBB6Q9BUF5 446 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 PPCSQ9HAB8 311 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 KCNK9Q9NPC2 374 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 MYOZ2Q9NPC6 264 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 SENP1Q9P0U3 644 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 NYAP2Q9P242 653 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 DNM3Q9UQ16 869 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 CHKBQ9Y259 395 aa13.39□□□□□ -0.27
APEX1-216ENST00000557159 GREB1LQ9C091 1923 aaPredicted RBP13.38□□□□□ -0.27
APEX1-216ENST00000557159 IQCA1LA6NCM1 817 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 SIGLEC16A6NMB1 481 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 ANKRD63C9JTQ0 380 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 CREB1P16220 341 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 IVDP26440 423 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 PTPN4P29074 926 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 VHLP40337 213 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 CASP4P49662 377 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 DYNC1I2Q13409 638 aaKnown RBP13.38□□□□□ -0.27
APEX1-216ENST00000557159 RASA2Q15283 850 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 SLC45A4Q5BKX6 768 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 SAMD7Q7Z3H4 446 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 FAM186BQ8IYM0 893 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 MGARPQ8TDB4 240 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 GRK7Q8WTQ7 553 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 TMEM174Q8WUU8 243 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 DCAF4Q8WV16 495 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 KRT35Q92764 455 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 ITFG2Q969R8 447 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 ERP27Q96DN0 273 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 DDX23Q9BUQ8 820 aaKnown RBP13.38□□□□□ -0.27
APEX1-216ENST00000557159 TRAIPQ9BWF2 469 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 TBC1D10AQ9BXI6 508 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 UBA5Q9GZZ9 404 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 SYNPO2Q9UMS6 1093 aa13.38□□□□□ -0.27
APEX1-216ENST00000557159 WNT10BO00744 389 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 ZBTB5O15062 677 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 P4HA2O15460 535 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 TGFB1I1O43294 461 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 AP1G2O75843 785 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 T-ENOLP0DO92 83 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 BCRP11274 1271 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 GM2AP17900 193 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 FOXN2P32314 431 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 ZRSR2Q15696 482 aaKnown RBP13.37□□□□□ -0.27
APEX1-216ENST00000557159 ANKRD42Q8N9B4 389 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 DENND1AQ8TEH3 1009 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 ZBED3Q96IU2 234 aaPredicted RBP13.37□□□□□ -0.27
APEX1-216ENST00000557159 PRMT6Q96LA8 375 aaPredicted RBP13.37□□□□□ -0.27
APEX1-216ENST00000557159 TIPINQ9BVW5 301 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 DNAJC18Q9H819 358 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 DMAC2Q9NW81 257 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 RGL1Q9NZL6 768 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 HACL1Q9UJ83 578 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 SMG5Q9UPR3 1016 aaKnown RBP13.37□□□□□ -0.27
APEX1-216ENST00000557159 PCDHAC2Q9Y5I4 1007 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 WDR90Q96KV7 1748 aa13.37□□□□□ -0.27
APEX1-216ENST00000557159 SPDYE2BA6NHP3 402 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 C2CD2LO14523 706 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 NVLO15381 856 aaKnown RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 ENTPD3O75355 529 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 ACSL3O95573 720 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 GH1P01241 217 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 SPDYE6P0CI01 402 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 PYGMP11217 842 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 SKIP12755 728 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 COMTP21964 271 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 MARK3P27448 753 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 RBM5P52756 815 aaKnown RBP eCLIP13.36□□□□□ -0.274e-13■■■□□ 17.9
APEX1-216ENST00000557159 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 DLGAP5Q15398 846 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 PDK4Q16654 411 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 GSTA3Q16772 222 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 CERKLQ49MI3 558 aaPredicted RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 TATDN1Q6P1N9 297 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 CATSPER3Q86XQ3 398 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 SLC9A9Q8IVB4 645 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 ADGRF4Q8IZF3 695 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 UHMK1Q8TAS1 419 aaKnown RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 KCNV2Q8TDN2 545 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 CRYGNQ8WXF5 182 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 MAML1Q92585 1016 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 INTS2Q9H0H0 1204 aaKnown RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 JMJD4Q9H9V9 463 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 ADARB2Q9NS39 739 aaKnown RBP13.36□□□□□ -0.27
APEX1-216ENST00000557159 TAS2R14Q9NYV8 317 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 UVRAGQ9P2Y5 699 aa13.36□□□□□ -0.27
APEX1-216ENST00000557159 SEL1LQ9UBV2 794 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms