RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 PAPLNO95428 1278 aa16.25■□□□□ 0.19
CHD8-211ENST00000556833 PEX3P56589 373 aa16.25■□□□□ 0.19
CHD8-211ENST00000556833 ELAVL2Q12926 359 aaKnown RBP16.25■□□□□ 0.19
CHD8-211ENST00000556833 PPP2R5AQ15172 486 aa16.25■□□□□ 0.19
CHD8-211ENST00000556833 SLC5A9Q2M3M2 681 aa16.25■□□□□ 0.19
CHD8-211ENST00000556833 DCAF4L1Q3SXM0 396 aa16.25■□□□□ 0.19
CHD8-211ENST00000556833 PHLDB3Q6NSJ2 640 aa16.25■□□□□ 0.19
CHD8-211ENST00000556833 CD300LGQ6UXG3 332 aa16.25■□□□□ 0.19
CHD8-211ENST00000556833 C1orf210Q8IVY1 113 aa16.25■□□□□ 0.19
CHD8-211ENST00000556833 NPAS3Q8IXF0 933 aa16.25■□□□□ 0.19
CHD8-211ENST00000556833 GPR65Q8IYL9 337 aa16.25■□□□□ 0.19
CHD8-211ENST00000556833 DCLK2Q8N568 766 aa16.25■□□□□ 0.19
CHD8-211ENST00000556833 DDX27Q96GQ7 796 aaKnown RBP16.25■□□□□ 0.19
CHD8-211ENST00000556833 PPP1R10Q96QC0 940 aaKnown RBP16.25■□□□□ 0.19
CHD8-211ENST00000556833 DDX19AQ9NUU7 478 aaKnown RBP16.25■□□□□ 0.19
CHD8-211ENST00000556833 SPATA6Q9NWH7 488 aaPredicted RBP16.25■□□□□ 0.19
CHD8-211ENST00000556833 MTRRQ9UBK8 725 aa16.25■□□□□ 0.19
CHD8-211ENST00000556833 PDCD11Q14690 1871 aaKnown RBP16.25■□□□□ 0.19
CHD8-211ENST00000556833 CEBPBP17676 345 aa16.24■□□□□ 0.19
CHD8-211ENST00000556833 FGFR3P22607 806 aa16.24■□□□□ 0.19
CHD8-211ENST00000556833 RAB33AQ14088 237 aa16.24■□□□□ 0.19
CHD8-211ENST00000556833 ZRSR1Q15695 479 aaKnown RBP16.24■□□□□ 0.19
CHD8-211ENST00000556833 MLF2Q15773 248 aaPredicted RBP16.24■□□□□ 0.19
CHD8-211ENST00000556833 ZNF568Q3ZCX4 644 aa16.24■□□□□ 0.19
CHD8-211ENST00000556833 HAUS3Q68CZ6 603 aa16.24■□□□□ 0.19
CHD8-211ENST00000556833 MTSS1LQ765P7 747 aa16.24■□□□□ 0.19
CHD8-211ENST00000556833 SNX29Q8TEQ0 813 aa16.24■□□□□ 0.19
CHD8-211ENST00000556833 CDT1Q9H211 546 aa16.24■□□□□ 0.19
CHD8-211ENST00000556833 LRWD1Q9UFC0 647 aa16.24■□□□□ 0.19
CHD8-211ENST00000556833 MRPS23Q9Y3D9 190 aaKnown RBP16.24■□□□□ 0.19
CHD8-211ENST00000556833 OTOGLQ3ZCN5 2332 aa16.24■□□□□ 0.19
CHD8-211ENST00000556833 SMIM28A0A1B0GU29 152 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 E9PMD0 336 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 K7ERI5 159 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 C1RP00736 705 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 RHOP08100 348 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 CDC25AP30304 524 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 RAD51AP2Q09MP3 1159 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 UPP1Q16831 310 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 SEZ6Q53EL9 994 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 SLC44A4Q53GD3 710 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 POTEHQ6S545 545 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 TPRG1Q6ZUI0 275 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 C18orf25Q96B23 403 aaPredicted RBP16.23■□□□□ 0.19
CHD8-211ENST00000556833 TARS2Q9BW92 718 aaKnown RBP16.23■□□□□ 0.19
CHD8-211ENST00000556833 PLA2G2FQ9BZM2 168 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 GPR179Q6PRD1 2367 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 TICRRQ7Z2Z1 1910 aa16.23■□□□□ 0.19
CHD8-211ENST00000556833 CEP250Q9BV73 2442 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 KANSL1LA0AUZ9 987 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 FAM170BA6NMN3 283 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 PODXLO00592 558 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 NRG2O14511 850 aaPredicted RBP16.22■□□□□ 0.19
CHD8-211ENST00000556833 PRRG1O14668 218 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 HIP1RO75146 1068 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 HOXA9P31269 272 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 NPTX2P47972 431 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 EFNA5P52803 228 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 YARSP54577 528 aaKnown RBP16.22■□□□□ 0.19
CHD8-211ENST00000556833 STARD6P59095 220 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 ROR1Q01973 937 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 GRM2Q14416 872 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 PDXDC1Q6P996 788 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 MAML2Q8IZL2 1156 aaPredicted RBP16.22■□□□□ 0.19
CHD8-211ENST00000556833 KIFAP3Q92845 792 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 RMDN1Q96DB5 314 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 TCEAL4Q96EI5 215 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 ZMAT2Q96NC0 199 aaKnown RBP16.22■□□□□ 0.19
CHD8-211ENST00000556833 CORO1BQ9BR76 489 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 RUSC1Q9BVN2 902 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 CCDC94Q9BW85 323 aaPredicted RBP16.22■□□□□ 0.19
CHD8-211ENST00000556833 LIMCH1Q9UPQ0 1083 aa16.22■□□□□ 0.19
CHD8-211ENST00000556833 ZFP37Q9Y6Q3 630 aaPredicted RBP16.22■□□□□ 0.19
CHD8-211ENST00000556833 PHLPP2Q6ZVD8 1323 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 WDR27A2RRH5 827 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 SFI1A8K8P3 1242 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 TMEM189-UBE2V1I3L0A0 370 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 LRG1P02750 347 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 CSTF1Q05048 431 aaKnown RBP16.21■□□□□ 0.19
CHD8-211ENST00000556833 VARS2Q5ST30 1063 aaKnown RBP16.21■□□□□ 0.19
CHD8-211ENST00000556833 ZC3H14Q6PJT7 736 aaKnown RBP16.21■□□□□ 0.19
CHD8-211ENST00000556833 TSSK4Q6SA08 328 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 ANKS3Q6ZW76 656 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 TAS1R3Q7RTX0 852 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 KCNK18Q7Z418 384 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 DAW1Q8N136 415 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 C4orf32Q8N8J7 132 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 FAM184AQ8NB25 1140 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 SHDQ96IW2 340 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 ZBTB45Q96K62 511 aaPredicted RBP16.21■□□□□ 0.19
CHD8-211ENST00000556833 PLIN2Q99541 437 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 ACO2Q99798 780 aaKnown RBP16.21■□□□□ 0.19
CHD8-211ENST00000556833 TCHPQ9BT92 498 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 FOXP1Q9H334 677 aaPredicted RBP16.21■□□□□ 0.19
CHD8-211ENST00000556833 CYP4F11Q9HBI6 524 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 HEBP1Q9NRV9 189 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 ANKFY1Q9P2R3 1169 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 NOL7Q9UMY1 257 aaKnown RBP16.21■□□□□ 0.19
CHD8-211ENST00000556833 TNFSF13BQ9Y275 285 aa16.21■□□□□ 0.19
CHD8-211ENST00000556833 PCDHB6Q9Y5E3 794 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms