RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 CCDC39Q9UFE4 941 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 TNFSF13BQ9Y275 285 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 SFI1A8K8P3 1242 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 LOC730098B7Z3J9 87 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 CLDN3O15551 220 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 RECQL4O94761 1208 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 GLUD1P00367 558 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 PLS3P13797 630 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 DSG1Q02413 1049 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 ZNF568Q3ZCX4 644 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 HERC4Q5GLZ8 1057 aaPredicted RBP8.03□□□□□ -1.12
SCFD1-222ENST00000556768 RARS2Q5T160 578 aaKnown RBP8.03□□□□□ -1.12
SCFD1-222ENST00000556768 TMC5Q6UXY8 1006 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 CEP57Q86XR8 500 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 BCL7CQ8WUZ0 217 aaPredicted RBP8.03□□□□□ -1.12
SCFD1-222ENST00000556768 BICD1Q96G01 975 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 MFSD14AQ96MC6 490 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 FBXL18Q96ME1 805 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 ACAP3Q96P50 834 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 KLHL5Q96PQ7 755 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 ACO2Q99798 780 aaKnown RBP8.03□□□□□ -1.12
SCFD1-222ENST00000556768 RUSC1Q9BVN2 902 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 PLEKHA4Q9H4M7 779 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 ZSCAN16Q9H4T2 348 aaPredicted RBP8.03□□□□□ -1.12
SCFD1-222ENST00000556768 SFXN1Q9H9B4 322 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 MIOSQ9NXC5 875 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 MUTYHQ9UIF7 546 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 RABGEF1Q9UJ41 708 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 WDFY4Q6ZS81 3184 aa8.03□□□□□ -1.12
SCFD1-222ENST00000556768 COL4A4P53420 1690 aaPredicted RBP8.02□□□□□ -1.12
SCFD1-222ENST00000556768 CASTOR2A6NHX0 329 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 K7ELQ4 463 aaPredicted RBP8.02□□□□□ -1.13
SCFD1-222ENST00000556768 SLC16A4O15374 487 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 TOM1L1O75674 476 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 B3GAT3O94766 335 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 C1RP00736 705 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 EPCAMP16422 314 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 SYT1P21579 422 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 CLCN4P51793 760 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 DHX8Q14562 1220 aaKnown RBP8.02□□□□□ -1.13
SCFD1-222ENST00000556768 CRTC2Q53ET0 693 aaPredicted RBP8.02□□□□□ -1.13
SCFD1-222ENST00000556768 NT5DC1Q5TFE4 455 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 FUT10Q6P4F1 479 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 DCLRE1AQ6PJP8 1040 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 CYP26C1Q6V0L0 522 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 C15orf39Q6ZRI6 1047 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 MYCT1Q8N699 235 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 GSTCDQ8NEC7 633 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 RIN2Q8WYP3 895 aaPredicted RBP8.02□□□□□ -1.13
SCFD1-222ENST00000556768 STAMQ92783 540 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 EDAQ92838 391 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 UROC1Q96N76 676 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 TTPALQ9BTX7 342 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 MMTAG2Q9BU76 263 aaKnown RBP8.02□□□□□ -1.13
SCFD1-222ENST00000556768 HERC2P3Q9BVR0 1158 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 ZHX3Q9H4I2 956 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 PARVGQ9HBI0 331 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 CHST7Q9NS84 486 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 ARHGAP28Q9P2N2 729 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 ODF2LQ9ULJ1 636 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 RALGAPA2Q2PPJ7 1873 aa8.02□□□□□ -1.13
SCFD1-222ENST00000556768 FAM86C2PA6NEL3 165 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 TEX28O15482 410 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 B4GALT3O60512 393 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 TBCAO75347 108 aaKnown RBP8.01□□□□□ -1.13
SCFD1-222ENST00000556768 FAM13AO94988 1023 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 MCF2P10911 925 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 DDIT3P35638 169 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 GRM5P41594 1212 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 SLC12A3P55017 1021 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 OSTNP61366 133 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 KYAT1Q16773 422 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 FAM171A1Q5VUB5 890 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 KIAA0319Q5VV43 1072 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 MPZL3Q6UWV2 235 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 ZPBP2Q6X784 338 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 CCDC149Q6ZUS6 474 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 OTOP3Q7RTS5 596 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 TAS1R1Q7RTX1 841 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 KCNK18Q7Z418 384 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 GPBP1Q86WP2 473 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 PALB2Q86YC2 1186 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 C12orf76Q8N812 135 aaPredicted RBP8.01□□□□□ -1.13
SCFD1-222ENST00000556768 TDRD5Q8NAT2 981 aaKnown RBP8.01□□□□□ -1.13
SCFD1-222ENST00000556768 FAM174AQ8TBP5 190 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 SLC22A17Q8WUG5 538 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 HDAC7Q8WUI4 952 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 TARS2Q9BW92 718 aaKnown RBP8.01□□□□□ -1.13
SCFD1-222ENST00000556768 VN1R3Q9BXE9 311 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 PIDD1Q9HB75 910 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 RXFP1Q9HBX9 757 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 MARCH5Q9NX47 278 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 KIAA1522Q9P206 1035 aaPredicted RBP8.01□□□□□ -1.13
SCFD1-222ENST00000556768 FNIP2Q9P278 1114 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 ANKFY1Q9P2R3 1169 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 USP20Q9Y2K6 914 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.01□□□□□ -1.13
SCFD1-222ENST00000556768 CCDC195A0A1B0GUA6 201 aa8.01□□□□□ -1.13
SCFD1-222ENST00000556768 HARSP12081 509 aaKnown RBP8.01□□□□□ -1.13
SCFD1-222ENST00000556768 SP100P23497 879 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms