RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 MCM2P49736 904 aa24.77■■□□□ 1.56
ACTN1-220ENST00000556433 XKR4Q5GH76 650 aa24.77■■□□□ 1.56
ACTN1-220ENST00000556433 GRASPQ7Z6J2 395 aaPredicted RBP24.77■■□□□ 1.56
ACTN1-220ENST00000556433 SLC44A3Q8N4M1 653 aa24.77■■□□□ 1.56
ACTN1-220ENST00000556433 KCTD17Q8N5Z5 321 aa24.77■■□□□ 1.56
ACTN1-220ENST00000556433 SYT2Q8N9I0 419 aaPredicted RBP24.77■■□□□ 1.56
ACTN1-220ENST00000556433 NXPE3Q969Y0 559 aa24.77■■□□□ 1.56
ACTN1-220ENST00000556433 CDK5RAP3Q96JB5 506 aa24.77■■□□□ 1.56
ACTN1-220ENST00000556433 ACAP3Q96P50 834 aa24.77■■□□□ 1.56
ACTN1-220ENST00000556433 SMC3Q9UQE7 1217 aa24.77■■□□□ 1.56
ACTN1-220ENST00000556433 CACNA1HO95180 2353 aa24.77■■□□□ 1.56
ACTN1-220ENST00000556433 HNRNPA1P09651 372 aaKnown RBP eCLIP24.76■■□□□ 1.55
ACTN1-220ENST00000556433 PROZP22891 400 aa24.76■■□□□ 1.55
ACTN1-220ENST00000556433 FSHRP23945 695 aa24.76■■□□□ 1.55
ACTN1-220ENST00000556433 SMTNP53814 917 aa24.76■■□□□ 1.55
ACTN1-220ENST00000556433 SOX4Q06945 474 aaPredicted RBP24.76■■□□□ 1.55
ACTN1-220ENST00000556433 STRN3Q13033 797 aa24.76■■□□□ 1.55
ACTN1-220ENST00000556433 RAB33AQ14088 237 aa24.76■■□□□ 1.55
ACTN1-220ENST00000556433 ARL6IP4Q66PJ3 421 aaKnown RBP24.76■■□□□ 1.55
ACTN1-220ENST00000556433 MPZL3Q6UWV2 235 aa24.76■■□□□ 1.55
ACTN1-220ENST00000556433 SPIRE2Q8WWL2 714 aa24.76■■□□□ 1.55
ACTN1-220ENST00000556433 DDX27Q96GQ7 796 aaKnown RBP24.76■■□□□ 1.55
ACTN1-220ENST00000556433 ZBTB45Q96K62 511 aaPredicted RBP24.76■■□□□ 1.55
ACTN1-220ENST00000556433 SLC38A7Q9NVC3 462 aa24.76■■□□□ 1.55
ACTN1-220ENST00000556433 MTRRQ9UBK8 725 aa24.76■■□□□ 1.55
ACTN1-220ENST00000556433 I3L4J1 428 aa24.75■■□□□ 1.55
ACTN1-220ENST00000556433 CFHP08603 1231 aa24.75■■□□□ 1.55
ACTN1-220ENST00000556433 PLA2G4BP0C869 781 aa24.75■■□□□ 1.55
ACTN1-220ENST00000556433 HARSP12081 509 aaKnown RBP24.75■■□□□ 1.55
ACTN1-220ENST00000556433 PLS3P13797 630 aa24.75■■□□□ 1.55
ACTN1-220ENST00000556433 NPR3P17342 541 aa24.75■■□□□ 1.55
ACTN1-220ENST00000556433 BRCC3P46736 316 aa24.75■■□□□ 1.55
ACTN1-220ENST00000556433 SIX5Q8N196 739 aa24.75■■□□□ 1.55
ACTN1-220ENST00000556433 C3orf58Q8NDZ4 430 aa24.75■■□□□ 1.55
ACTN1-220ENST00000556433 ZMAT2Q96NC0 199 aaKnown RBP24.75■■□□□ 1.55
ACTN1-220ENST00000556433 ABLIM1O14639 778 aa24.74■■□□□ 1.55
ACTN1-220ENST00000556433 CCL16O15467 120 aa24.74■■□□□ 1.55
ACTN1-220ENST00000556433 TKTP29401 623 aaKnown RBP24.74■■□□□ 1.55
ACTN1-220ENST00000556433 SLC12A3P55017 1021 aa24.74■■□□□ 1.55
ACTN1-220ENST00000556433 NTHL1P78549 312 aa24.74■■□□□ 1.55
ACTN1-220ENST00000556433 AXDND1Q5T1B0 1012 aaPredicted RBP24.74■■□□□ 1.55
ACTN1-220ENST00000556433 LARP1BQ659C4 914 aaKnown RBP24.74■■□□□ 1.55
ACTN1-220ENST00000556433 CWF19L1Q69YN2 538 aaKnown RBP24.74■■□□□ 1.55
ACTN1-220ENST00000556433 RSPO2Q6UXX9 243 aaPredicted RBP24.74■■□□□ 1.55
ACTN1-220ENST00000556433 ANKS3Q6ZW76 656 aa24.74■■□□□ 1.55
ACTN1-220ENST00000556433 TMEM161BQ8NDZ6 487 aa24.74■■□□□ 1.55
ACTN1-220ENST00000556433 SNX27Q96L92 541 aa24.74■■□□□ 1.55
ACTN1-220ENST00000556433 WNT16Q9UBV4 365 aa24.74■■□□□ 1.55
ACTN1-220ENST00000556433 POLIQ9UNA4 740 aa24.74■■□□□ 1.55
ACTN1-220ENST00000556433 BACE2Q9Y5Z0 518 aa24.74■■□□□ 1.55
ACTN1-220ENST00000556433 CDY1Q9Y6F8 540 aa24.74■■□□□ 1.55
ACTN1-220ENST00000556433 PODXLO00592 558 aa24.73■■□□□ 1.55
ACTN1-220ENST00000556433 XYLBO75191 536 aa24.73■■□□□ 1.55
ACTN1-220ENST00000556433 KCNE1P15382 129 aa24.73■■□□□ 1.55
ACTN1-220ENST00000556433 HOXA9P31269 272 aa24.73■■□□□ 1.55
ACTN1-220ENST00000556433 UVSSAQ2YD98 709 aa24.73■■□□□ 1.55
ACTN1-220ENST00000556433 SLC7A14Q8TBB6 771 aa24.73■■□□□ 1.55
ACTN1-220ENST00000556433 KCND2Q9NZV8 630 aa24.73■■□□□ 1.55
ACTN1-220ENST00000556433 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.73■■□□□ 1.55
ACTN1-220ENST00000556433 ZFP37Q9Y6Q3 630 aaPredicted RBP24.73■■□□□ 1.55
ACTN1-220ENST00000556433 TRIP11Q15643 1979 aa24.73■■□□□ 1.55
ACTN1-220ENST00000556433 NPHP3-ACAD11A0A0J9YXS1 232 aa24.72■■□□□ 1.55
ACTN1-220ENST00000556433 ANHXE9PGG2 379 aa24.72■■□□□ 1.55
ACTN1-220ENST00000556433 STK25O00506 426 aa24.72■■□□□ 1.55
ACTN1-220ENST00000556433 PI15O43692 258 aa24.72■■□□□ 1.55
ACTN1-220ENST00000556433 TOM1L1O75674 476 aa24.72■■□□□ 1.55
ACTN1-220ENST00000556433 MAPTP10636 758 aaKnown RBP24.72■■□□□ 1.55
ACTN1-220ENST00000556433 AOC1P19801 751 aa24.72■■□□□ 1.55
ACTN1-220ENST00000556433 CACNB1Q02641 598 aaPredicted RBP24.72■■□□□ 1.55
ACTN1-220ENST00000556433 TMEM119Q4V9L6 283 aa24.72■■□□□ 1.55
ACTN1-220ENST00000556433 ST13P5Q8NFI4 369 aaPredicted RBP24.72■■□□□ 1.55
ACTN1-220ENST00000556433 AK8Q96MA6 479 aa24.72■■□□□ 1.55
ACTN1-220ENST00000556433 CNTN3Q9P232 1028 aa24.72■■□□□ 1.55
ACTN1-220ENST00000556433 ANKFY1Q9P2R3 1169 aa24.72■■□□□ 1.55
ACTN1-220ENST00000556433 DOCK8Q8NF50 2099 aa24.71■■□□□ 1.55
ACTN1-220ENST00000556433 VWA8A3KMH1 1905 aa24.71■■□□□ 1.55
ACTN1-220ENST00000556433 SRFP11831 508 aa24.71■■□□□ 1.55
ACTN1-220ENST00000556433 RPL9P32969 192 aaKnown RBP24.71■■□□□ 1.55
ACTN1-220ENST00000556433 HTR4Q13639 388 aa24.71■■□□□ 1.55
ACTN1-220ENST00000556433 SEZ6Q53EL9 994 aa24.71■■□□□ 1.55
ACTN1-220ENST00000556433 ARSHQ5FYA8 562 aa24.71■■□□□ 1.55
ACTN1-220ENST00000556433 C18orf25Q96B23 403 aaPredicted RBP24.71■■□□□ 1.55
ACTN1-220ENST00000556433 CDH7Q9ULB5 785 aa24.71■■□□□ 1.55
ACTN1-220ENST00000556433 NUMBLQ9Y6R0 609 aa24.71■■□□□ 1.55
ACTN1-220ENST00000556433 DOCK6Q96HP0 2047 aa24.7■■□□□ 1.54
ACTN1-220ENST00000556433 MEFVO15553 781 aaPredicted RBP24.7■■□□□ 1.54
ACTN1-220ENST00000556433 UBA7P41226 1012 aa24.7■■□□□ 1.54
ACTN1-220ENST00000556433 NOLC1Q14978 699 aaKnown RBP eCLIP24.7■■□□□ 1.54
ACTN1-220ENST00000556433 SLC10A6Q3KNW5 377 aa24.7■■□□□ 1.54
ACTN1-220ENST00000556433 ZPBP2Q6X784 338 aa24.7■■□□□ 1.54
ACTN1-220ENST00000556433 CALML4Q96GE6 196 aa24.7■■□□□ 1.54
ACTN1-220ENST00000556433 RTP3Q9BQQ7 232 aa24.7■■□□□ 1.54
ACTN1-220ENST00000556433 LARSQ9P2J5 1176 aaKnown RBP24.7■■□□□ 1.54
ACTN1-220ENST00000556433 CA14Q9ULX7 337 aa24.7■■□□□ 1.54
ACTN1-220ENST00000556433 NUB1Q9Y5A7 615 aa24.7■■□□□ 1.54
ACTN1-220ENST00000556433 KRBA1A5PL33 1030 aa24.69■■□□□ 1.54
ACTN1-220ENST00000556433 CLDN3O15551 220 aa24.69■■□□□ 1.54
ACTN1-220ENST00000556433 SLC26A4O43511 780 aa24.69■■□□□ 1.54
ACTN1-220ENST00000556433 MATR3P43243 847 aaKnown RBP eCLIP24.69■■□□□ 1.541e-6■■■■□ 23.1
ACTN1-220ENST00000556433 VARS2Q5ST30 1063 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms