RNA–Protein interactions for RNA: ENST00000556348.1

CCDC85C-205, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5

Gene CCDC85C, Length 556 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-205ENST00000556348 ATP2B1P20020 1258 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 FGFR3P22607 806 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 ELF1P32519 619 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 TXKP42681 527 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 NRLP54845 237 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 MTAPQ13126 283 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 LPAL2Q16609 132 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 MAPK6Q16659 721 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 EARS2Q5JPH6 523 aaKnown RBP12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 TANGO2Q6ICL3 276 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 RTL10Q7L3V2 364 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 MCPH1Q8NEM0 835 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 NELL1Q92832 810 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 C2orf40Q9H1Z8 148 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 FZD8Q9H461 694 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 PDZD7Q9H5P4 517 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 BRD9Q9H8M2 597 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 BRMS1Q9HCU9 246 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 PDRG1Q9NUG6 133 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 MTRRQ9UBK8 725 aa12.58□□□□□ -0.4
CCDC85C-205ENST00000556348 SPTBN2O15020 2390 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 FAM205CA6NFA0 338 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 PRRG1O14668 218 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 XRCC6P12956 609 aaKnown RBP eCLIP12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 KRT2P35908 639 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 SPEM2Q0P670 501 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 SCRN1Q12765 414 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 GRM2Q14416 872 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 FAM187BQ17R55 369 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 SLC5A9Q2M3M2 681 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 PRR23BQ6ZRT6 265 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 ANKS3Q6ZW76 656 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 DNASE1L2Q92874 299 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 ELSPBP1Q96BH3 223 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 CXCL16Q9H2A7 254 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 ZFP14Q9HCL3 533 aa12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 PRMT8Q9NR22 394 aaPredicted RBP12.57□□□□□ -0.4
CCDC85C-205ENST00000556348 NOTCH4Q99466 2003 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 TTLL13PA6NNM8 815 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 I3L4J1 428 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 DTNBO60941 627 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 PRKCBP05771 671 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 CEBPBP17676 345 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 TKTP29401 623 aaKnown RBP12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 CLCNKBP51801 687 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 ARPP19P56211 112 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 NR5A1Q13285 461 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 NAB2Q15742 525 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 GLRA4Q5JXX5 417 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 CDCA2Q69YH5 1023 aaPredicted RBP12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 DEPTORQ8TB45 409 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 WASF1Q92558 559 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 CHAMP1Q96JM3 812 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 CORO1BQ9BR76 489 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 TRMT61BQ9BVS5 477 aaKnown RBP12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 PARD6AQ9NPB6 346 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 ORC3Q9UBD5 711 aaPredicted RBP12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 USP20Q9Y2K6 914 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 BACE2Q9Y5Z0 518 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 VWA8A3KMH1 1905 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 STK36Q9NRP7 1315 aa12.56□□□□□ -0.4
CCDC85C-205ENST00000556348 TMEM189-UBE2V1I3L0A0 370 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 ACKR2O00590 384 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 ZNF197O14709 1029 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 NEMFO60524 1076 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 TGM1P22735 817 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 IGFBP6P24592 240 aaPredicted RBP12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 BRCC3P46736 316 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 RBM25P49756 843 aaKnown RBP12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 FZD5Q13467 585 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 ST3GAL2Q16842 350 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 FAM78AQ5JUQ0 283 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 CYP4A22Q5TCH4 519 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 LAIR1Q6GTX8 287 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 PDZD4Q76G19 769 aaPredicted RBP12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 APBB1IPQ7Z5R6 666 aaPredicted RBP12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 ELMOD1Q8N336 334 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 CELF5Q8N6W0 485 aaKnown RBP12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 ZNF461Q8TAF7 563 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 FAM3CQ92520 227 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 IRF7Q92985 503 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 DDX27Q96GQ7 796 aaKnown RBP12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 UROC1Q96N76 676 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 TM6SF1Q9BZW5 370 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 CHRDQ9H2X0 955 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 LMAN1LQ9HAT1 526 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 CYP4F11Q9HBI6 524 aa12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 AVENQ9NQS1 362 aaPredicted RBP12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.55□□□□□ -0.4
CCDC85C-205ENST00000556348 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.54□□□□□ -0.4
CCDC85C-205ENST00000556348 ARHGEF37A1IGU5 675 aa12.54□□□□□ -0.4
CCDC85C-205ENST00000556348 ADRB1P08588 477 aa12.54□□□□□ -0.4
CCDC85C-205ENST00000556348 KCNA4P22459 653 aa12.54□□□□□ -0.4
CCDC85C-205ENST00000556348 GDI1P31150 447 aa12.54□□□□□ -0.4
CCDC85C-205ENST00000556348 CCR3P51677 355 aa12.54□□□□□ -0.4
CCDC85C-205ENST00000556348 ROR1Q01973 937 aa12.54□□□□□ -0.4
CCDC85C-205ENST00000556348 UPP1Q16831 310 aa12.54□□□□□ -0.4
CCDC85C-205ENST00000556348 DCAF4L1Q3SXM0 396 aa12.54□□□□□ -0.4
CCDC85C-205ENST00000556348 PPM1JQ5JR12 505 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms