RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 CT47B1P0C2W7 299 aaPredicted RBP4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 ZSCAN20P17040 1043 aaPredicted RBP4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 PDCP20941 246 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 SLC6A2P23975 617 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 CHN2P52757 468 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 ZNF280AP59817 542 aaPredicted RBP4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 SLC25A3Q00325 362 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 NHLH2Q02577 135 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 PIN1Q13526 163 aaPredicted RBP4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 TOB2Q14106 344 aaPredicted RBP4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 RABL3Q5HYI8 236 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 RRP12Q5JTH9 1297 aaKnown RBP4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 TMEM240Q5SV17 173 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 HTR3DQ70Z44 454 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 DCBLD1Q8N8Z6 715 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 CYFIP2Q96F07 1278 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 CLPTM1LQ96KA5 538 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 RHOBTB2Q9BYZ6 727 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 SLC2A4RGQ9NR83 387 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 FBXO34Q9NWN3 711 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 ZNF180Q9UJW8 692 aa4.73□□□□□ -1.65
SUPT16H-206ENST00000556309 DRGXA6NNA5 263 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 ZNF185O15231 689 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 PJA2O43164 708 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 S100BP04271 92 aaPredicted RBP4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 ITGB1P05556 798 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 SBK3P0C264 359 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 CDC42EP1Q00587 391 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 DSC2Q02487 901 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 LRRC41Q15345 812 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 GJC2Q5T442 439 aaPredicted RBP4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 NAIF1Q69YI7 327 aaPredicted RBP4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 IGFL4Q6B9Z1 124 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 OTUD7BQ6GQQ9 843 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 MED25Q71SY5 747 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 TPH2Q8IWU9 490 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 DRC7Q8IY82 874 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 ZFP28Q8NHY6 868 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 IFI44Q8TCB0 444 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 CASKIN2Q8WXE0 1202 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 JPH3Q8WXH2 748 aaPredicted RBP4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 ZNF503Q96F45 646 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 LRGUKQ96M69 825 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 NEU1Q99519 415 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 VRK1Q99986 396 aaPredicted RBP4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 GTPBP4Q9BZE4 634 aaKnown RBP4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 TRPM5Q9NZQ8 1165 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 ZIM2Q9NZV7 527 aa4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 NOB1Q9ULX3 412 aaKnown RBP4.72□□□□□ -1.65
SUPT16H-206ENST00000556309 AHRRA9YTQ3 701 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 NPIPB8E9PQR5 432 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 PRSS23O95084 383 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 ZNF202O95125 648 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 POMCP01189 267 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 POU2F2P09086 479 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 NR4A1P22736 598 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 CTXN1P60606 82 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 FAM189BP81408 668 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 CREMQ03060 361 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 ZNF267Q14586 743 aaPredicted RBP4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 UBXN2BQ14CS0 331 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 LSM12Q3MHD2 195 aaKnown RBP4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 KHDC1Q4VXA5 237 aaKnown RBP4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 METTL24Q5JXM2 366 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 DRICH1Q6PGQ1 229 aaPredicted RBP4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 SEM1Q6ZVN7 128 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 CACTINQ8WUQ7 758 aaKnown RBP4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 JDP2Q8WYK2 163 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 MRGPRX4Q96LA9 322 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 FAM193BQ96PV7 902 aaPredicted RBP4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 DMRTA2Q96SC8 542 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 C11orf54Q9H0W9 315 aaPredicted RBP4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 GSTO2Q9H4Y5 243 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 PARPBPQ9NWS1 579 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 AURKAIP1Q9NWT8 199 aaPredicted RBP4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 CLCA2Q9UQC9 943 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 ANKRD6Q9Y2G4 727 aa4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 USP15Q9Y4E8 981 aaPredicted RBP4.71□□□□□ -1.66
SUPT16H-206ENST00000556309 CCDC78A2IDD5 438 aa4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 TGM1P22735 817 aa4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 ATXN1P54253 815 aaKnown RBP4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 EPHB1P54762 984 aa4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 NANOS3P60323 173 aaKnown RBP4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 PDCD4Q53EL6 469 aaKnown RBP4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 FAM102AQ5T9C2 384 aaPredicted RBP4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 TSHZ3Q63HK5 1081 aa4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 METRNLQ641Q3 311 aa4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 PPP4R3AQ6IN85 833 aa4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 GADL1Q6ZQY3 521 aa4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 USP45Q70EL2 814 aa4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 PLXDC1Q8IUK5 500 aa4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 DNAJC10Q8IXB1 793 aa4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 ZNF703Q9H7S9 590 aaPredicted RBP4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 TCF7L1Q9HCS4 588 aa4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 MAP3K2Q9Y2U5 619 aa4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 REXO2Q9Y3B8 237 aaKnown RBP4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 PCDHA3Q9Y5H8 950 aa4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 EID1Q9Y6B2 187 aa4.7□□□□□ -1.66
SUPT16H-206ENST00000556309 CDHR4A6H8M9 788 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms