RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 TADA2BQ86TJ2 420 aa15.81■□□□□ 0.12
NEK9-209ENST00000556170 TRIM11Q96F44 468 aa15.81■□□□□ 0.12
NEK9-209ENST00000556170 COX16Q9P0S2 106 aa15.81■□□□□ 0.12
NEK9-209ENST00000556170 LRP5O75197 1615 aa15.81■□□□□ 0.12
NEK9-209ENST00000556170 NUGGCQ68CJ6 796 aa15.81■□□□□ 0.12
NEK9-209ENST00000556170 SEMA4DQ92854 862 aa15.81■□□□□ 0.12
NEK9-209ENST00000556170 ANKRD36BP1Q96IX9 119 aa15.81■□□□□ 0.12
NEK9-209ENST00000556170 FAM49AQ9H0Q0 323 aaPredicted RBP15.81■□□□□ 0.12
NEK9-209ENST00000556170 KIAA1586Q9HCI6 787 aa15.81■□□□□ 0.12
NEK9-209ENST00000556170 FAM53CQ9NYF3 392 aa15.81■□□□□ 0.12
NEK9-209ENST00000556170 STK38LQ9Y2H1 464 aa15.81■□□□□ 0.12
NEK9-209ENST00000556170 CAND2O75155 1236 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 LDHAP00338 332 aaKnown RBP15.8■□□□□ 0.12
NEK9-209ENST00000556170 CLTAP09496 248 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 RALAP11233 206 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 MAGEA9P43362 315 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 ZBTB16Q05516 673 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 Q3C1V9 767 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 SPATA33Q96N06 139 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 SAYSD1Q9NPB0 183 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 GTF3C4Q9UKN8 822 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 UBIAD1Q9Y5Z9 338 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 KRT10P13645 584 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 NLRP11P59045 1033 aaKnown RBP15.8■□□□□ 0.12
NEK9-209ENST00000556170 CYP24A1Q07973 514 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 FBXW10Q5XX13 1052 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 FAM47EQ6ZV65 393 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 CPNE8Q86YQ8 564 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 ZNF473Q8WTR7 871 aaKnown RBP15.8■□□□□ 0.12
NEK9-209ENST00000556170 HSPH1Q92598 858 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 ARHGEF2Q92974 986 aaKnown RBP15.8■□□□□ 0.12
NEK9-209ENST00000556170 COL16A1Q07092 1604 aaPredicted RBP15.8■□□□□ 0.12
NEK9-209ENST00000556170 WDR91A4D1P6 747 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 PSMA2P25787 234 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 POLR2BP30876 1174 aaKnown RBP15.8■□□□□ 0.12
NEK9-209ENST00000556170 PPATQ06203 517 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 C6orf118Q5T5N4 469 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 VSIG10LQ86VR7 867 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 PALM2Q8IXS6 379 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 TMEM35BQ8NCS4 154 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 TMEM161BQ8NDZ6 487 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 RUBCNQ92622 972 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 GPRASP2Q96D09 838 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 HEXIM2Q96MH2 286 aaKnown RBP15.8■□□□□ 0.12
NEK9-209ENST00000556170 UVRAGQ9P2Y5 699 aa15.8■□□□□ 0.12
NEK9-209ENST00000556170 P4HA2O15460 535 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 MUTP22033 750 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 BASP1P80723 227 aaKnown RBP15.79■□□□□ 0.12
NEK9-209ENST00000556170 HADHQ16836 314 aaKnown RBP15.79■□□□□ 0.12
NEK9-209ENST00000556170 SMTNL2Q2TAL5 461 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 HHATQ5VTY9 493 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 ACAD10Q6JQN1 1059 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 RFX6Q8HWS3 928 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 CCDC197Q8NCU1 140 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 EPN3Q9H201 632 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 CCDC88AQ3V6T2 1871 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 XIRP1Q702N8 1843 aaKnown RBP15.79■□□□□ 0.12
NEK9-209ENST00000556170 A0A0A6YYK5 440 aaPredicted RBP15.79■□□□□ 0.12
NEK9-209ENST00000556170 FDX1P10109 184 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 COILP38432 576 aaPredicted RBP15.79■□□□□ 0.12
NEK9-209ENST00000556170 PTGER2P43116 358 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 CYP4A22Q5TCH4 519 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 NLRP7Q8WX94 980 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 PCDHB18PQ96TA0 734 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 TRIM7Q9C029 511 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 ERVK-5Q9HDB9 667 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 EXOC1LA0A1B0GW35 172 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 GTF2H1P32780 548 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 NAA25Q14CX7 972 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 BBS9Q3SYG4 887 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 CROCCP2Q86T23 111 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 VSIG1Q86XK7 387 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 APOBEC3FQ8IUX4 373 aaKnown RBP15.79■□□□□ 0.12
NEK9-209ENST00000556170 RHOT1Q8IXI2 618 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 CCDC63Q8NA47 563 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 EPS8L3Q8TE67 593 aaKnown RBP15.79■□□□□ 0.12
NEK9-209ENST00000556170 PRPF31Q8WWY3 499 aaKnown RBP15.79■□□□□ 0.12
NEK9-209ENST00000556170 MCEEQ96PE7 176 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 RPF1Q9H9Y2 349 aaKnown RBP15.79■□□□□ 0.12
NEK9-209ENST00000556170 COG5Q9UP83 839 aa15.79■□□□□ 0.12
NEK9-209ENST00000556170 H7C0C1 242 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 TCF7P36402 384 aaPredicted RBP15.78■□□□□ 0.12
NEK9-209ENST00000556170 ATP5OP48047 213 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 NEDD9Q14511 834 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 ZNF667Q5HYK9 610 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 SPIRE2Q8WWL2 714 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 TCP11Q8WWU5 503 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 NEUROG2Q9H2A3 272 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 EXTL3O43909 919 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 OATP04181 439 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 CHN1P15882 459 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 GBP1P32455 592 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 GPS1Q13098 491 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 OR6B2Q6IFH4 312 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 FOXR2Q6PJQ5 311 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 TRAPPC12Q8WVT3 735 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 CLEC4DQ8WXI8 215 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 BSNDQ8WZ55 320 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 KREMEN1Q96MU8 473 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 TIPINQ9BVW5 301 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms