RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 FDXACB1Q9BRP7 624 aaPredicted RBP15.84■□□□□ 0.13
VPS33B-205ENST00000556096 NOCTQ9UK39 431 aaKnown RBP15.84■□□□□ 0.13
VPS33B-205ENST00000556096 B4GALT5O43286 388 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 SGPL1O95470 568 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 INHAP05111 366 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 IQCF3P0C7M6 154 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 TCP1P17987 556 aaKnown RBP15.83■□□□□ 0.13
VPS33B-205ENST00000556096 USP8P40818 1118 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 GALCP54803 685 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 PRMT2P55345 433 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 CDC42EP1Q00587 391 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 AMHR2Q16671 573 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 ZNF568Q3ZCX4 644 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 SEZ6Q53EL9 994 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 SMYD5Q6GMV2 418 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 MTERF4Q7Z6M4 381 aaKnown RBP15.83■□□□□ 0.13
VPS33B-205ENST00000556096 ZNF410Q86VK4 478 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 KIAA0319LQ8IZA0 1049 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 OR5B17Q8NGF7 314 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 EPS8L1Q8TE68 723 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 DHX38Q92620 1227 aaKnown RBP15.83■□□□□ 0.13
VPS33B-205ENST00000556096 RABGGTAQ92696 567 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 NRCAMQ92823 1304 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 LENG1Q96BZ8 264 aaPredicted RBP15.83■□□□□ 0.13
VPS33B-205ENST00000556096 ZNF668Q96K58 619 aaPredicted RBP15.83■□□□□ 0.13
VPS33B-205ENST00000556096 PI4K2AQ9BTU6 479 aa15.83■□□□□ 0.13
VPS33B-205ENST00000556096 CTAGE15A4D2H0 777 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 CYP26A1O43174 497 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 PALMO75781 387 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 VTNP04004 478 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 CTAGE8P0CG41 777 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 GZMAP12544 262 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 CPT1AP50416 773 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 RBM10P98175 930 aaKnown RBP15.82■□□□□ 0.12
VPS33B-205ENST00000556096 CKAP4Q07065 602 aaKnown RBP15.82■□□□□ 0.12
VPS33B-205ENST00000556096 MFSD14CQ5VZR4 134 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 EEF1DP3Q658K8 133 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 CTAGE6Q86UF2 777 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 CTAGE4Q8IX94 777 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 TRPV1Q8NER1 839 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 SLC20A1Q8WUM9 679 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 LMBR1Q8WVP7 490 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 KAT2BQ92831 832 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 ISCUQ9H1K1 167 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 CDT1Q9H211 546 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.82■□□□□ 0.12
VPS33B-205ENST00000556096 PUF60Q9UHX1 559 aaKnown RBP15.82■□□□□ 0.12
VPS33B-205ENST00000556096 HYOU1Q9Y4L1 999 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 NCANO14594 1321 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 ANKRD62A6NC57 917 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 HAS3O00219 553 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 B4GALT4O60513 344 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 MCF2P10911 925 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 PRKAR2AP13861 404 aaKnown RBP15.82■□□□□ 0.12
VPS33B-205ENST00000556096 CYP11B1P15538 503 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 CHRNB2P17787 502 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 CACNB2Q08289 660 aaPredicted RBP15.82■□□□□ 0.12
VPS33B-205ENST00000556096 KYAT1Q16773 422 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 DUOXA2Q1HG44 320 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 TMEM132AQ24JP5 1023 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 NOP9Q86U38 636 aaKnown RBP15.82■□□□□ 0.12
VPS33B-205ENST00000556096 RPUSD2Q8IZ73 545 aaKnown RBP15.82■□□□□ 0.12
VPS33B-205ENST00000556096 GPR161Q8N6U8 529 aaKnown RBP15.82■□□□□ 0.12
VPS33B-205ENST00000556096 SLAIN1Q8ND83 568 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 FAM84AQ96KN4 292 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 RPGRIP1Q96KN7 1286 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 TLR10Q9BXR5 811 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 AP5M1Q9H0R1 490 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 SETD4Q9NVD3 440 aa15.82■□□□□ 0.12
VPS33B-205ENST00000556096 MBLAC1A4D2B0 266 aaPredicted RBP15.81■□□□□ 0.12
VPS33B-205ENST00000556096 GRID2IPA4D2P6 1211 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 PHACTR2O75167 634 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 IL18RAPO95256 599 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 HMGCRP04035 888 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 SMIM10L2AP0DMW4 78 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 SMIM10L2BP0DMW5 78 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 CYBAP13498 195 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 TBXAS1P24557 533 aaPredicted RBP15.81■□□□□ 0.12
VPS33B-205ENST00000556096 CCND3P30281 292 aaPredicted RBP15.81■□□□□ 0.12
VPS33B-205ENST00000556096 BPIFB4P59827 614 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 CDR2Q01850 454 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 NCOA4Q13772 614 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 MTFR1Q15390 333 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 MEI1Q5TIA1 1274 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 NFRKBQ6P4R8 1299 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 SLC47A2Q86VL8 602 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 THNSL1Q8IYQ7 743 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 PXYLP1Q8TE99 480 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 NLRP7Q8WX94 980 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 CTNNBL1Q8WYA6 563 aaPredicted RBP15.81■□□□□ 0.12
VPS33B-205ENST00000556096 CALR3Q96L12 384 aaKnown RBP15.81■□□□□ 0.12
VPS33B-205ENST00000556096 OSBPL9Q96SU4 736 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 MYH10P35580 1976 aa15.81■□□□□ 0.12
VPS33B-205ENST00000556096 SMIM35A0A1B0GVV1 85 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 SRGAP2O75044 1071 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 RTN2O75298 545 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 CLTAP09496 248 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 NOP2P46087 812 aaKnown RBP15.8■□□□□ 0.12
VPS33B-205ENST00000556096 PDE6CP51160 858 aa15.8■□□□□ 0.12
VPS33B-205ENST00000556096 MFSD10Q14728 455 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms