RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 ZFHX2Q9C0A1 2572 aaPredicted RBP3.93□□□□□ -1.78
EFCAB11-210ENST00000556078 NUP98P52948 1817 aa3.93□□□□□ -1.78
EFCAB11-210ENST00000556078 DDX60Q8IY21 1712 aaKnown RBP3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 NBEAQ8NFP9 2946 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 KIF24Q5T7B8 1368 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 ASH1LQ9NR48 2969 aaKnown RBP3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 ZAR1LA6NP61 321 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 PROB1E7EW31 1015 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 PDE6AP16499 860 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 ATF4P18848 351 aaPredicted RBP3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 IBSPP21815 317 aaPredicted RBP3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 NASPP49321 788 aaPredicted RBP3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 HGFACQ04756 655 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 SREBF2Q12772 1141 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 PRKG1Q13976 671 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 WDR72Q3MJ13 1102 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 SDE2Q6IQ49 451 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 ZNF662Q6ZS27 426 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 RHOUQ7L0Q8 258 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 MCF2L2Q86YR7 1114 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 ANKRD35Q8N283 1001 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 LENG9Q96B70 501 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 DCPSQ96C86 337 aaKnown RBP3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 POLR3GLQ9BT43 218 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 OR10A2Q9H208 303 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 PIF1Q9H611 641 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 SLC39A2Q9NP94 309 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 GPR27Q9NS67 375 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 THEGQ9P2T0 379 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 A0A0G2JMZ2 1700 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 ZZEF1O43149 2961 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 CENPJQ9HC77 1338 aaPredicted RBP3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 FRYQ5TBA9 3013 aa3.92□□□□□ -1.78
EFCAB11-210ENST00000556078 GPR179Q6PRD1 2367 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 PSMD14O00487 310 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 MAST4O15021 2626 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 SLC26A4O43511 780 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 SGPL1O95470 568 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 CAPNS1P04632 268 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 ZNF37AP17032 561 aaPredicted RBP3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 KCNJ6P48051 423 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 SCNN1GP51170 649 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 EIF5P55010 431 aaKnown RBP3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 MRPS5P82675 430 aaKnown RBP3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 RBL2Q08999 1139 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 SPIRE1Q08AE8 756 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 DBPQ10586 325 aaPredicted RBP3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 TOB2Q14106 344 aaPredicted RBP3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 C9orf50Q5SZB4 431 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 SHCBP1Q8NEM2 672 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 ANAPC16Q96DE5 110 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 CLMNQ96JQ2 1002 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 SRPK1Q96SB4 655 aaKnown RBP3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 AGO3Q9H9G7 860 aaKnown RBP3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 DSEQ9UL01 958 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 CDHR2Q9BYE9 1310 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 WDFY3Q8IZQ1 3526 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 LOC400499M0QZD8 3231 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 ECM29Q5VYK3 1845 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 KIF20BQ96Q89 1820 aa3.91□□□□□ -1.78
EFCAB11-210ENST00000556078 ABCC12Q96J65 1359 aa3.9□□□□□ -1.78
EFCAB11-210ENST00000556078 TPRP12270 2363 aaKnown RBP3.9□□□□□ -1.78
EFCAB11-210ENST00000556078 LRRC37AA6NMS7 1700 aa3.9□□□□□ -1.78
EFCAB11-210ENST00000556078 EDC4Q6P2E9 1401 aaKnown RBP3.9□□□□□ -1.78
EFCAB11-210ENST00000556078 ERVV-2B6SEH9 535 aa3.9□□□□□ -1.79
EFCAB11-210ENST00000556078 H7C1D1 291 aa3.9□□□□□ -1.79
EFCAB11-210ENST00000556078 ITGB8P26012 769 aa3.9□□□□□ -1.79
EFCAB11-210ENST00000556078 ST5P78524 1137 aa3.9□□□□□ -1.79
EFCAB11-210ENST00000556078 SLC39A6Q13433 755 aa3.9□□□□□ -1.79
EFCAB11-210ENST00000556078 SHHQ15465 462 aa3.9□□□□□ -1.79
EFCAB11-210ENST00000556078 KCTD1Q719H9 257 aa3.9□□□□□ -1.79
EFCAB11-210ENST00000556078 GAREM2Q75VX8 874 aa3.9□□□□□ -1.79
EFCAB11-210ENST00000556078 RASGRP4Q8TDF6 673 aa3.9□□□□□ -1.79
EFCAB11-210ENST00000556078 PPARGC1AQ9UBK2 798 aaKnown RBP3.9□□□□□ -1.79
EFCAB11-210ENST00000556078 SH3BP1Q9Y3L3 701 aa3.9□□□□□ -1.79
EFCAB11-210ENST00000556078 RTL1A6NKG5 1358 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 RTL9Q8NET4 1388 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 PLXNB2O15031 1838 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 hCG_2014768A0A024R1R8 64 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 NKRFO15226 690 aaKnown RBP eCLIP3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 CAMTA2O94983 1202 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 FGRP09769 529 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 ANAPC15P60006 121 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 FKBP1BP68106 108 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 MAP4K2Q12851 820 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 CNGB1Q14028 1251 aaPredicted RBP3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 ACAP1Q15027 740 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 STILQ15468 1287 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 RNF187Q5TA31 235 aaPredicted RBP3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 RSPO2Q6UXX9 243 aaPredicted RBP3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 ANKS3Q6ZW76 656 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 VRK3Q8IV63 474 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 PRSS33Q8NF86 280 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 SLC25A43Q8WUT9 341 aaPredicted RBP3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 MIEF2Q96C03 454 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 TMEM176AQ96HP8 235 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 SEC16BQ96JE7 1060 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 DEFB118Q96PH6 123 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 SLC12A5Q9H2X9 1139 aa3.89□□□□□ -1.79
EFCAB11-210ENST00000556078 LRP2BPQ9P2M1 347 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms