RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 A0A1B0GUA9 196 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 FAM181BA6NEQ2 426 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 CD2BP2O95400 341 aaKnown RBP7.39□□□□□ -1.23
PSEN1-216ENST00000556066 SOD2P04179 222 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 ADH1AP07327 375 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 SPATA31D3P0C874 917 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 RPA1P27694 616 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 GLUD2P49448 558 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 CLCN4P51793 760 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 PRPF4BQ13523 1007 aaKnown RBP7.39□□□□□ -1.23
PSEN1-216ENST00000556066 SPATA31D4Q6ZUB0 917 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 BMP8AQ7Z5Y6 402 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 PALB2Q86YC2 1186 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 NOSTRINQ8IVI9 506 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 FBXL6Q8N531 539 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 FAM160A2Q8N612 972 aaPredicted RBP7.39□□□□□ -1.23
PSEN1-216ENST00000556066 DEPTORQ8TB45 409 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 FEZF2Q8TBJ5 459 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 POLR3CQ9BUI4 534 aaPredicted RBP7.39□□□□□ -1.23
PSEN1-216ENST00000556066 HERC2P3Q9BVR0 1158 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 NFKBIZQ9BYH8 718 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 SMOC2Q9H3U7 446 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 SFXN1Q9H9B4 322 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 MAN1C1Q9NR34 630 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 SH2B1Q9NRF2 756 aaPredicted RBP7.39□□□□□ -1.23
PSEN1-216ENST00000556066 PRMT7Q9NVM4 692 aaPredicted RBP7.39□□□□□ -1.23
PSEN1-216ENST00000556066 CACNG4Q9UBN1 327 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 SORCS3Q9UPU3 1222 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 SSX2IPQ9Y2D8 614 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 USP20Q9Y2K6 914 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 CEP250Q9BV73 2442 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 DOCK8Q8NF50 2099 aa7.39□□□□□ -1.23
PSEN1-216ENST00000556066 ACACBO00763 2458 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 SPTBN2O15020 2390 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 CASTOR2A6NHX0 329 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 N4BP3O15049 544 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 INPPL1O15357 1258 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 TEX28O15482 410 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 TADA2AO75478 443 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 BRD1O95696 1058 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 GLUD1P00367 558 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 PDGFBP01127 241 aaPredicted RBP7.38□□□□□ -1.23
PSEN1-216ENST00000556066 PRKCBP05771 671 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 CYP11B2P19099 503 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 NAMPTP43490 491 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 DSC1Q08554 894 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 GRIK3Q13003 919 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 ORC2Q13416 577 aaPredicted RBP7.38□□□□□ -1.23
PSEN1-216ENST00000556066 MTMR3Q13615 1198 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 PPP2R5AQ15172 486 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 ZRSR1Q15695 479 aaKnown RBP7.38□□□□□ -1.23
PSEN1-216ENST00000556066 ECM1Q16610 540 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 MAPK6Q16659 721 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 LCE2AQ5TA79 106 aaPredicted RBP7.38□□□□□ -1.23
PSEN1-216ENST00000556066 HAUS3Q68CZ6 603 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 CDCA2Q69YH5 1023 aaPredicted RBP7.38□□□□□ -1.23
PSEN1-216ENST00000556066 MCTP1Q6DN14 999 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 FUT10Q6P4F1 479 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 ELMSAN1Q6PJG2 1045 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 LYPD8Q6UX82 237 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 CCDC149Q6ZUS6 474 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 GPR149Q86SP6 731 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 CEP57Q86XR8 500 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 GSTCDQ8NEC7 633 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 SNX29Q8TEQ0 813 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 HASPINQ8TF76 798 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 RIN2Q8WYP3 895 aaPredicted RBP7.38□□□□□ -1.23
PSEN1-216ENST00000556066 BSNDQ8WZ55 320 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 ACSF2Q96CM8 615 aaPredicted RBP7.38□□□□□ -1.23
PSEN1-216ENST00000556066 ASIC4Q96FT7 647 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 IFT74Q96LB3 600 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 PRIMPOLQ96LW4 560 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 KIF2CQ99661 725 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 ADPGKQ9BRR6 497 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 KIFC3Q9BVG8 833 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 GPR62Q9BZJ7 368 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 C2orf40Q9H1Z8 148 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 BHMT2Q9H2M3 363 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 FZD8Q9H461 694 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 PDZD7Q9H5P4 517 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 DDX19AQ9NUU7 478 aaKnown RBP7.38□□□□□ -1.23
PSEN1-216ENST00000556066 SNTG2Q9NY99 539 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 LRWD1Q9UFC0 647 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 ADAM28Q9UKQ2 775 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 KIAA1024Q9UPX6 916 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 GDAQ9Y2T3 454 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 VWA8A3KMH1 1905 aa7.38□□□□□ -1.23
PSEN1-216ENST00000556066 CHD6Q8TD26 2715 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 VPS13AQ96RL7 3174 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 CCDC195A0A1B0GUA6 201 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 CCDC169A6NNP5 214 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 PP2D1A8MPX8 630 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 ACKR2O00590 384 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 RFPL2O75678 378 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 RECQL4O94761 1208 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 THP07101 528 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 JUNDP17535 347 aa7.37□□□□□ -1.23
PSEN1-216ENST00000556066 RPL17P18621 184 aaKnown RBP7.37□□□□□ -1.23
PSEN1-216ENST00000556066 GBP2P32456 591 aaPredicted RBP7.37□□□□□ -1.23
PSEN1-216ENST00000556066 TRAPPC10P48553 1259 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms