RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 DGKDQ16760 1214 aa10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 MAP9Q49MG5 647 aa10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 GLE1Q53GS7 698 aaKnown RBP10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 BEND6Q5SZJ8 279 aaPredicted RBP10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 KRT222Q8N1A0 295 aa10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 DDX1Q92499 740 aaKnown RBP10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 ARHGEF26Q96DR7 871 aa10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 GOLPH3Q9H4A6 298 aa10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 TUT1Q9H6E5 874 aaKnown RBP10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 PTPRHQ9HD43 1115 aa10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 ABCB6Q9NP58 842 aa10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 ZCCHC17Q9NP64 241 aaKnown RBP10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 ACP6Q9NPH0 428 aa10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 FAM53CQ9NYF3 392 aa10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 CTTNBP2NLQ9P2B4 639 aa10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 CPSF3Q9UKF6 684 aaKnown RBP10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 ZHX1Q9UKY1 873 aaPredicted RBP10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 STXBP5LQ9Y2K9 1186 aa10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 PLXNA1Q9UIW2 1896 aa10.84□□□□□ -0.67
EFCAB11-209ENST00000556005 MANSC4A6NHS7 340 aaPredicted RBP10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 ABLIM1O14639 778 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 TBC1D8O95759 1140 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 ZNF157P51786 506 aaPredicted RBP10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 CBX1P83916 185 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 CUL2Q13617 745 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 FAM187BQ17R55 369 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 DUOXA2Q1HG44 320 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 ZNF568Q3ZCX4 644 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 OR6J1Q8NGC5 347 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 OR5B17Q8NGF7 314 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 NPLOC4Q8TAT6 608 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 ACTRT1Q8TDG2 376 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 FAM212AQ96EL1 285 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 HES6Q96HZ4 224 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 EHD2Q9NZN4 543 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 AKT3Q9Y243 479 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 TNFSF13BQ9Y275 285 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 CLSTN1O94985 981 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 ITGBL1O95965 494 aaPredicted RBP10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 MMP3P08254 477 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 ZNF286BP0CG31 522 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 HOXD8P13378 290 aaPredicted RBP10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 NOP14P78316 857 aaKnown RBP10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 IRF5Q13568 498 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 SPOPLQ6IQ16 392 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 ACAD10Q6JQN1 1059 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 MTHFD1LQ6UB35 978 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 HDXQ7Z353 690 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 IFNLR1Q8IU57 520 aaPredicted RBP10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 THNSL1Q8IYQ7 743 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 LINC01465Q8N7H1 131 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 USP38Q8NB14 1042 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 ELMO3Q96BJ8 720 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 ZBTB10Q96DT7 871 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 ZNF668Q96K58 619 aaPredicted RBP10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 FAM84AQ96KN4 292 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 LRRC1Q9BTT6 524 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 FUT8Q9BYC5 575 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 IFT122Q9HBG6 1241 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 RBM12Q9NTZ6 932 aaKnown RBP10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 SMARCAL1Q9NZC9 954 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 CPA4Q9UI42 421 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 L1RE1Q9UN81 338 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 COG5Q9UP83 839 aa10.83□□□□□ -0.68
EFCAB11-209ENST00000556005 A0A087WZ62 844 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 B4GALT5O43286 388 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 CEP104O60308 925 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 ZEB2O60315 1214 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 MTA2O94776 668 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 CLTAP09496 248 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 TNFAIP2Q03169 654 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 PPFIA1Q13136 1202 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 MAP2K5Q13163 448 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 TRPC3Q13507 836 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 SGSM1Q2NKQ1 1148 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 C8orf74Q6P047 294 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 FDXACB1Q9BRP7 624 aaPredicted RBP10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 MINDY3Q9H8M7 445 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 APOBEC3GQ9HC16 384 aaKnown RBP10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 UVRAGQ9P2Y5 699 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 GTF3C4Q9UKN8 822 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 PCDHB4Q9Y5E5 795 aa10.82□□□□□ -0.68
EFCAB11-209ENST00000556005 PGRMC1O00264 195 aaKnown RBP10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 MAP2K7O14733 419 aa10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 B4GALT4O60513 344 aa10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 IL18RAPO95256 599 aa10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 ASS1P00966 412 aaKnown RBP10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 CST3P01034 146 aaPredicted RBP10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 CYP1A2P05177 515 aa10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 TMEM191BP0C7N4 346 aa10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 ACO1P21399 889 aaKnown RBP10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 RNASE9P60153 205 aaKnown RBP10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 TNNC1P63316 161 aa10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 POU5F1Q01860 360 aaKnown RBP10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 TAF1CQ15572 869 aaPredicted RBP10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 CLUL1Q15846 466 aa10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 GRIK4Q16099 956 aa10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 KYAT1Q16773 422 aa10.81□□□□□ -0.68
EFCAB11-209ENST00000556005 PTPROQ16827 1216 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms