RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 NCAM2O15394 837 aa18.63■□□□□ 0.57
XRCC3-215ENST00000555964 KINO60870 393 aaKnown RBP18.63■□□□□ 0.57
XRCC3-215ENST00000555964 NEFLP07196 543 aa18.63■□□□□ 0.57
XRCC3-215ENST00000555964 TRAPPC10P48553 1259 aa18.63■□□□□ 0.57
XRCC3-215ENST00000555964 NTHL1P78549 312 aa18.63■□□□□ 0.57
XRCC3-215ENST00000555964 SNW1Q13573 536 aaKnown RBP18.63■□□□□ 0.57
XRCC3-215ENST00000555964 ZNF528Q3MIS6 628 aa18.63■□□□□ 0.57
XRCC3-215ENST00000555964 RUBCNQ92622 972 aa18.63■□□□□ 0.57
XRCC3-215ENST00000555964 PPP1R10Q96QC0 940 aaKnown RBP18.63■□□□□ 0.57
XRCC3-215ENST00000555964 DDX23Q9BUQ8 820 aaKnown RBP18.63■□□□□ 0.57
XRCC3-215ENST00000555964 FBXO4Q9UKT5 387 aa18.63■□□□□ 0.57
XRCC3-215ENST00000555964 NOL7Q9UMY1 257 aaKnown RBP18.63■□□□□ 0.57
XRCC3-215ENST00000555964 MRPS23Q9Y3D9 190 aaKnown RBP18.63■□□□□ 0.57
XRCC3-215ENST00000555964 MYH11P35749 1972 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 K7ERI5 159 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 SPTLC1O15269 473 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 ADAM12O43184 909 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 LAMTOR5O43504 91 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 ELF1P32519 619 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 CCT6AP40227 531 aaKnown RBP18.62■□□□□ 0.57
XRCC3-215ENST00000555964 UBXN2BQ14CS0 331 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 UPP1Q16831 310 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 SLC44A4Q53GD3 710 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 EEF1DP3Q658K8 133 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 NPAS3Q8IXF0 933 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 ITFG1Q8TB96 612 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 NELL2Q99435 816 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 RPP25Q9BUL9 199 aaKnown RBP18.62■□□□□ 0.57
XRCC3-215ENST00000555964 BHMT2Q9H2M3 363 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 AVENQ9NQS1 362 aaPredicted RBP18.62■□□□□ 0.57
XRCC3-215ENST00000555964 SPATA6Q9NWH7 488 aaPredicted RBP18.62■□□□□ 0.57
XRCC3-215ENST00000555964 TNFSF13BQ9Y275 285 aa18.62■□□□□ 0.57
XRCC3-215ENST00000555964 MRPS17Q9Y2R5 130 aaKnown RBP18.62■□□□□ 0.57
XRCC3-215ENST00000555964 ECI2O75521 394 aa18.61■□□□□ 0.57
XRCC3-215ENST00000555964 LRG1P02750 347 aa18.61■□□□□ 0.57
XRCC3-215ENST00000555964 FXR2P51116 673 aaKnown RBP eCLIP18.61■□□□□ 0.57
XRCC3-215ENST00000555964 CLCNKBP51801 687 aa18.61■□□□□ 0.57
XRCC3-215ENST00000555964 DMP1Q13316 513 aaPredicted RBP18.61■□□□□ 0.57
XRCC3-215ENST00000555964 ZNF174Q15697 407 aa18.61■□□□□ 0.57
XRCC3-215ENST00000555964 GLRA4Q5JXX5 417 aa18.61■□□□□ 0.57
XRCC3-215ENST00000555964 TTC38Q5R3I4 469 aa18.61■□□□□ 0.57
XRCC3-215ENST00000555964 LLPHQ9BRT6 129 aaKnown RBP18.61■□□□□ 0.57
XRCC3-215ENST00000555964 KIFC3Q9BVG8 833 aa18.61■□□□□ 0.57
XRCC3-215ENST00000555964 MRPL4Q9BYD3 311 aaKnown RBP18.61■□□□□ 0.57
XRCC3-215ENST00000555964 ZNF292O60281 2723 aa18.61■□□□□ 0.57
XRCC3-215ENST00000555964 CEP250Q9BV73 2442 aa18.61■□□□□ 0.57
XRCC3-215ENST00000555964 F5P12259 2224 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 H7C4K7 107 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 PRRG1O14668 218 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 SYN3O14994 580 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 RHOP08100 348 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 TKTP29401 623 aaKnown RBP18.6■□□□□ 0.57
XRCC3-215ENST00000555964 GRM5P41594 1212 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 HMGN5P82970 282 aaKnown RBP18.6■□□□□ 0.57
XRCC3-215ENST00000555964 GUCY1B3Q02153 619 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 ZNF568Q3ZCX4 644 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 ZBTB41Q5SVQ8 909 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 NT5DC1Q5TFE4 455 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 ZNF461Q8TAF7 563 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 SECISBP2LQ93073 1101 aaKnown RBP18.6■□□□□ 0.57
XRCC3-215ENST00000555964 KXD1Q9BQD3 176 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 LTB4R2Q9NPC1 389 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 DNMT3BQ9UBC3 853 aaKnown RBP18.6■□□□□ 0.57
XRCC3-215ENST00000555964 LRWD1Q9UFC0 647 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 PCDHGA2Q9Y5H1 932 aa18.6■□□□□ 0.57
XRCC3-215ENST00000555964 PDCD11Q14690 1871 aaKnown RBP18.6■□□□□ 0.57
XRCC3-215ENST00000555964 SMIM28A0A1B0GU29 152 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 ARHGEF37A1IGU5 675 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 FAM170BA6NMN3 283 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 CCDC169A6NNP5 214 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 EDN1P05305 212 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 GLULP15104 373 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 PTPN2P17706 415 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 PUM1Q14671 1186 aaKnown RBP eCLIP18.59■□□□□ 0.57
XRCC3-215ENST00000555964 SLC8B1Q6J4K2 584 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 ZNF852Q6ZMS4 543 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 KIAA2013Q8IYS2 634 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 ELMOD1Q8N336 334 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 ST13P5Q8NFI4 369 aaPredicted RBP18.59■□□□□ 0.57
XRCC3-215ENST00000555964 ATRIPQ8WXE1 791 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 DNASE1L2Q92874 299 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 DRC1Q96MC2 740 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 TMEM134Q9H6X4 195 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 HCFC1R1Q9NWW0 138 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 KCNG1Q9UIX4 513 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 KIAA1024Q9UPX6 916 aa18.59■□□□□ 0.57
XRCC3-215ENST00000555964 RBM19Q9Y4C8 960 aaKnown RBP18.59■□□□□ 0.57
XRCC3-215ENST00000555964 ZNF197O14709 1029 aa18.58■□□□□ 0.56
XRCC3-215ENST00000555964 RPL9P32969 192 aaKnown RBP18.58■□□□□ 0.56
XRCC3-215ENST00000555964 ROR1Q01973 937 aa18.58■□□□□ 0.56
XRCC3-215ENST00000555964 PDIA5Q14554 519 aa18.58■□□□□ 0.56
XRCC3-215ENST00000555964 VARS2Q5ST30 1063 aaKnown RBP18.58■□□□□ 0.56
XRCC3-215ENST00000555964 TPRG1Q6ZUI0 275 aa18.58■□□□□ 0.56
XRCC3-215ENST00000555964 DGLUCYQ7Z3D6 616 aa18.58■□□□□ 0.56
XRCC3-215ENST00000555964 GPR161Q8N6U8 529 aaKnown RBP18.58■□□□□ 0.56
XRCC3-215ENST00000555964 FAM184AQ8NB25 1140 aa18.58■□□□□ 0.56
XRCC3-215ENST00000555964 SNX29Q8TEQ0 813 aa18.58■□□□□ 0.56
XRCC3-215ENST00000555964 ING5Q8WYH8 240 aa18.58■□□□□ 0.56
XRCC3-215ENST00000555964 ELSPBP1Q96BH3 223 aa18.58■□□□□ 0.56
XRCC3-215ENST00000555964 CXCL16Q9H2A7 254 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms