RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 GAP43P17677 238 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 RPL17P18621 184 aaKnown RBP14.93□□□□□ -0.02
SNX6-203ENST00000555416 ADSSP30520 456 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 GLUD2P49448 558 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 SMAD2Q15796 467 aaKnown RBP14.93□□□□□ -0.02
SNX6-203ENST00000555416 ENOX2Q16206 610 aaKnown RBP14.93□□□□□ -0.02
SNX6-203ENST00000555416 UPP1Q16831 310 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 HERC4Q5GLZ8 1057 aaPredicted RBP14.93□□□□□ -0.02
SNX6-203ENST00000555416 RTP2Q5QGT7 225 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 PRSS55Q6UWB4 352 aaPredicted RBP14.93□□□□□ -0.02
SNX6-203ENST00000555416 C12orf76Q8N812 135 aaPredicted RBP14.93□□□□□ -0.02
SNX6-203ENST00000555416 IQUBQ8NA54 791 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 SPATA32Q96LK8 384 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 BLZF1Q9H2G9 400 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 TNMDQ9H2S6 317 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 GDPD2Q9HCC8 539 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 OLFML3Q9NRN5 406 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 MRPL17Q9NRX2 175 aaKnown RBP14.93□□□□□ -0.02
SNX6-203ENST00000555416 TOPORSQ9NS56 1045 aaPredicted RBP14.93□□□□□ -0.02
SNX6-203ENST00000555416 SEL1LQ9UBV2 794 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 TUBGCP4Q9UGJ1 667 aa14.93□□□□□ -0.02
SNX6-203ENST00000555416 VWA8A3KMH1 1905 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 LACTBL1A8MY62 500 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 OGTO15294 1046 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 URODP06132 367 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 CLTAP09496 248 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 WEE2P0C1S8 567 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 BRCC3P46736 316 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 CLCN4P51793 760 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 GUCY2FP51841 1108 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 ZP2Q05996 745 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 BECN1Q14457 450 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 PUS10Q3MIT2 529 aaKnown RBP14.92□□□□□ -0.02
SNX6-203ENST00000555416 RIN2Q8WYP3 895 aaPredicted RBP14.92□□□□□ -0.02
SNX6-203ENST00000555416 SUSD6Q92537 303 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 RXFP1Q9HBX9 757 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 SERTAD1Q9UHV2 236 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 KCNH3Q9ULD8 1083 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 STYXL1Q9Y6J8 313 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 PLXNA3P51805 1871 aa14.92□□□□□ -0.02
SNX6-203ENST00000555416 PDCD11Q14690 1871 aaKnown RBP14.92□□□□□ -0.02
SNX6-203ENST00000555416 SF3B1O75533 1304 aaKnown RBP eCLIP14.92□□□□□ -0.025e-7■■■■■ 106.3
SNX6-203ENST00000555416 A0A1B0GVL5 298 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 ADAM12O43184 909 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 ACTN4O43707 911 aaKnown RBP14.91□□□□□ -0.02
SNX6-203ENST00000555416 B3GAT3O94766 335 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 PRPF6O94906 941 aaKnown RBP14.91□□□□□ -0.02
SNX6-203ENST00000555416 GCNT3O95395 438 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 PFKFB1P16118 471 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 SCP2P22307 547 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 KLRC2P26717 231 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 HOXD13P35453 343 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 ACOT2P49753 483 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 WNT7BP56706 349 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 KRT85P78386 507 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 BMS1Q14692 1282 aaKnown RBP14.91□□□□□ -0.02
SNX6-203ENST00000555416 ZBTB6Q15916 424 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 USP41Q3LFD5 358 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 TPRNQ4KMQ1 711 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 L1TD1Q5T7N2 865 aaKnown RBP14.91□□□□□ -0.02
SNX6-203ENST00000555416 FAM171A1Q5VUB5 890 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 CRELD2Q6UXH1 353 aaPredicted RBP14.91□□□□□ -0.02
SNX6-203ENST00000555416 CEP57Q86XR8 500 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 GLYCTKQ8IVS8 523 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 CASP10Q92851 521 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 C7orf25Q9BPX7 421 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 MSTO1Q9BUK6 570 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 CUEDC2Q9H467 287 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 FAM13BQ9NYF5 915 aa14.91□□□□□ -0.02
SNX6-203ENST00000555416 CPSF3Q9UKF6 684 aaKnown RBP14.91□□□□□ -0.02
SNX6-203ENST00000555416 TMEM189-UBE2V1I3L0A0 370 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 PODXLO00592 558 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 ADRB2P07550 413 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 SPATA31D3P0C874 917 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 CMA1P23946 247 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 AFMP43652 599 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 ASIC1P78348 528 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 EHHADHQ08426 723 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 CUL4BQ13620 913 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 RARS2Q5T160 578 aaKnown RBP14.9□□□□□ -0.02
SNX6-203ENST00000555416 ADALQ6DHV7 355 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 KIAA1841Q6NSI8 718 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 CNNM4Q6P4Q7 775 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 DCLRE1AQ6PJP8 1040 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 SPATA31D4Q6ZUB0 917 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 CCDC65Q8IXS2 484 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 LNX1Q8TBB1 728 aaPredicted RBP14.9□□□□□ -0.02
SNX6-203ENST00000555416 ACCSQ96QU6 501 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 TTPALQ9BTX7 342 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 EMILIN2Q9BXX0 1053 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 GOLPH3LQ9H4A5 285 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 STK39Q9UEW8 545 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 HPSEQ9Y251 543 aa14.9□□□□□ -0.02
SNX6-203ENST00000555416 FSD2A1L4K1 749 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 C19orf67A6NJJ6 358 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 PPEF2O14830 753 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 FGFR3P22607 806 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 TKTP29401 623 aaKnown RBP14.89□□□□□ -0.03
SNX6-203ENST00000555416 NDUFA8P51970 172 aa14.89□□□□□ -0.03
SNX6-203ENST00000555416 JADE1Q6IE81 842 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms