RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 FAM86B2P0C5J1 330 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 SERPINB3P29508 390 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 PSMC2P35998 433 aaKnown RBP9.45□□□□□ -0.9
SYNE2-217ENST00000555022 JAM2P57087 298 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 SP4Q02446 784 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 FRMD5Q7Z6J6 570 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 SLC7A6OSQ96CW6 309 aaPredicted RBP9.45□□□□□ -0.9
SYNE2-217ENST00000555022 SMC6Q96SB8 1091 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 PCDHAC2Q9Y5I4 1007 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 SYNGAP1Q96PV0 1343 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 MYOCOSA0A1B0GUC4 107 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 TBX10O75333 385 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 RNF8O76064 485 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 TTLL1O95922 423 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 GNAZP19086 355 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 GPC5P78333 572 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 PPP3CAQ08209 521 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 SEPT2Q15019 361 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 MAPK6Q16659 721 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 PLEKHG4Q58EX7 1191 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 OTOAQ7RTW8 1153 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.45□□□□□ -0.9
SYNE2-217ENST00000555022 STK33Q9BYT3 514 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 TYW1Q9NV66 732 aaKnown RBP9.45□□□□□ -0.9
SYNE2-217ENST00000555022 SLC17A7Q9P2U7 560 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 APEX2Q9UBZ4 518 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 TIAM2Q8IVF5 1701 aa9.45□□□□□ -0.9
SYNE2-217ENST00000555022 A6NJR5 290 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 ERVV-1B6SEH8 477 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 H0YIN7 160 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 H3BRJ5 948 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 K7ENM7 598 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 UFL1O94874 794 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 KRT4P19013 534 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 ARHGAP4P98171 946 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 SBK1Q52WX2 424 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 PCNX4Q63HM2 1172 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 IZUMO2Q6UXV1 221 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 ASAP3Q8TDY4 903 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 ART4Q93070 314 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 CADM1Q9BY67 442 aaKnown RBP9.44□□□□□ -0.9
SYNE2-217ENST00000555022 GPR88Q9GZN0 384 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 ZNF148Q9UQR1 794 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 OR6B1O95007 311 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 ABCB11O95342 1321 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 MAPK4P31152 587 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 SOX10P56693 466 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 PEX6Q13608 980 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 CUL3Q13618 768 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 PDIA5Q14554 519 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 EML3Q32P44 896 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 TMEM63BQ5T3F8 832 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 RINT1Q6NUQ1 792 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 CCDC174Q6PII3 467 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 RINLQ6ZS11 566 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 ALYREFQ86V81 257 aaKnown RBP9.44□□□□□ -0.9
SYNE2-217ENST00000555022 GBP7Q8N8V2 638 aaPredicted RBP9.44□□□□□ -0.9
SYNE2-217ENST00000555022 OLIG1Q8TAK6 271 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 PODXLO00592 558 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 AHCYL1O43865 530 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 MAP3K6O95382 1288 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 PGM3O95394 542 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 SPATA31C1P0DKV0 1188 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 TCF4P15884 667 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 MARK3P27448 753 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 GSTT1P30711 240 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 SSTR1P30872 391 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 PRKCIP41743 596 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 EPHB1P54762 984 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 GTF2IP78347 998 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 ALCAMQ13740 583 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 LRRC23Q53EV4 343 aaPredicted RBP9.44□□□□□ -0.9
SYNE2-217ENST00000555022 BRINP3Q76B58 766 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 NEDD1Q8NHV4 660 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 MAGEB18Q96M61 343 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 TUBGCP5Q96RT8 1024 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 C11orf70Q9BRQ4 267 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 VCXQ9H320 206 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 CYP4F11Q9HBI6 524 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 GPRC5CQ9NQ84 441 aa9.44□□□□□ -0.9
SYNE2-217ENST00000555022 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.44□□□□□ -0.9
SYNE2-217ENST00000555022 SORBS2O94875 1100 aaKnown RBP9.43□□□□□ -0.9
SYNE2-217ENST00000555022 FESP07332 822 aa9.43□□□□□ -0.9
SYNE2-217ENST00000555022 PCP11498 1178 aaKnown RBP9.43□□□□□ -0.9
SYNE2-217ENST00000555022 MAGEA4P43358 317 aa9.43□□□□□ -0.9
SYNE2-217ENST00000555022 MRPS35P82673 323 aaKnown RBP9.43□□□□□ -0.9
SYNE2-217ENST00000555022 MCL1Q07820 350 aa9.43□□□□□ -0.9
SYNE2-217ENST00000555022 GPS1Q13098 491 aa9.43□□□□□ -0.9
SYNE2-217ENST00000555022 EDRF1Q3B7T1 1238 aa9.43□□□□□ -0.9
SYNE2-217ENST00000555022 LRRC74BQ6ZQY2 392 aa9.43□□□□□ -0.9
SYNE2-217ENST00000555022 SNF8Q96H20 258 aa9.43□□□□□ -0.9
SYNE2-217ENST00000555022 RUNDC3BQ96NL0 473 aa9.43□□□□□ -0.9
SYNE2-217ENST00000555022 EIF2AK1Q9BQI3 630 aaKnown RBP9.43□□□□□ -0.9
SYNE2-217ENST00000555022 GORASP1Q9BQQ3 440 aa9.43□□□□□ -0.9
SYNE2-217ENST00000555022 ETNK2Q9NVF9 386 aa9.43□□□□□ -0.9
SYNE2-217ENST00000555022 LMCD1Q9NZU5 365 aa9.43□□□□□ -0.9
SYNE2-217ENST00000555022 CCDC88AQ3V6T2 1871 aa9.43□□□□□ -0.9
SYNE2-217ENST00000555022 KDM3AQ9Y4C1 1321 aa9.43□□□□□ -0.9
SYNE2-217ENST00000555022 ARHGAP42A6NI28 874 aa9.43□□□□□ -0.9
SYNE2-217ENST00000555022 HAUS5O94927 633 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms