RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 XYLT2Q9H1B5 865 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 ANKZF1Q9H8Y5 726 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 ACP6Q9NPH0 428 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.59□□□□□ -0.87
TDP1-210ENST00000554976 COG5Q9UP83 839 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 V9GYY5 206 aaPredicted RBP9.59□□□□□ -0.87
TDP1-210ENST00000554976 SMIM35A0A1B0GVV1 85 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 BUB1O43683 1085 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 TACC1O75410 805 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 PALMO75781 387 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 MTA2O94776 668 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 CST3P01034 146 aaPredicted RBP9.59□□□□□ -0.87
TDP1-210ENST00000554976 MCF2P10911 925 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 CYP11B1P15538 503 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 PHKA2P46019 1235 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 AP3M2P53677 418 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 CEP112Q8N8E3 955 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 CEP120Q8N960 986 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 ARHGEF26Q96DR7 871 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 NOX5Q96PH1 765 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 MMS19Q96T76 1030 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 NUB1Q9Y5A7 615 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 SAR1BQ9Y6B6 198 aa9.59□□□□□ -0.87
TDP1-210ENST00000554976 MYADML2A6NDP7 307 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 ZNF185O15231 689 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 ASS1P00966 412 aaKnown RBP9.58□□□□□ -0.88
TDP1-210ENST00000554976 MMEP08473 750 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 CLTAP09496 248 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 ARF4P18085 180 aaPredicted RBP9.58□□□□□ -0.88
TDP1-210ENST00000554976 IGBP1P78318 339 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 ITIH3Q06033 890 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 SPOPLQ6IQ16 392 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 ZBTB33Q86T24 672 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 RPUSD2Q8IZ73 545 aaKnown RBP9.58□□□□□ -0.88
TDP1-210ENST00000554976 SMC1BQ8NDV3 1235 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 TRIB2Q92519 343 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 FAM81BQ96LP2 452 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 NRCAMQ92823 1304 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 A0A1B0GUA9 196 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 RRN3P2A6NIE6 340 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 TMEM88BA6NKF7 163 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 CES2O00748 559 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 CYP26A1O43174 497 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 NCK2O43639 380 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 CCDC172P0C7W6 258 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 UNGP13051 313 aaPredicted RBP9.58□□□□□ -0.88
TDP1-210ENST00000554976 HOXA11P31270 313 aaPredicted RBP9.58□□□□□ -0.88
TDP1-210ENST00000554976 PURAQ00577 322 aaKnown RBP9.58□□□□□ -0.88
TDP1-210ENST00000554976 CDR2Q01850 454 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 CUL2Q13617 745 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 MFSD10Q14728 455 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 NFRKBQ6P4R8 1299 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 COG1Q8WTW3 980 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 U2AF1L4Q8WU68 220 aaKnown RBP9.58□□□□□ -0.88
TDP1-210ENST00000554976 ZNF668Q96K58 619 aaPredicted RBP9.58□□□□□ -0.88
TDP1-210ENST00000554976 OSBPL9Q96SU4 736 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 CDHR5Q9HBB8 845 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 SETD4Q9NVD3 440 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 GABRQQ9UN88 632 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 CYP1A1P04798 512 aaPredicted RBP9.58□□□□□ -0.88
TDP1-210ENST00000554976 GZMAP12544 262 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 PIK3CAP42336 1068 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 ASPAP45381 313 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 GJA9P57773 515 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 LACTBP83111 547 aaPredicted RBP9.58□□□□□ -0.88
TDP1-210ENST00000554976 PPM1KQ8N3J5 372 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 METTL13Q8N6R0 699 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 RABGGTAQ92696 567 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 THAP2Q9H0W7 228 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 FAM53CQ9NYF3 392 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 SIX4Q9UIU6 781 aa9.58□□□□□ -0.88
TDP1-210ENST00000554976 ANKRD62A6NC57 917 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 DYNC1LI2O43237 492 aaPredicted RBP9.57□□□□□ -0.88
TDP1-210ENST00000554976 H2AFZP0C0S5 128 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 CYP2B6P20813 491 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 PSEN2P49810 448 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 ZNF568Q3ZCX4 644 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 FBXO38Q6PIJ6 1188 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 H2AFVQ71UI9 128 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 TMEM130Q8N3G9 435 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 RFFLQ8WZ73 363 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 CPB2Q96IY4 423 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 MTMR12Q9C0I1 747 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 LUC7LQ9NQ29 371 aaKnown RBP9.57□□□□□ -0.88
TDP1-210ENST00000554976 ZNF446Q9NWS9 450 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 RAB21Q9UL25 225 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 RTN2O75298 545 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 CYP1A2P05177 515 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 TNNI1P19237 187 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 CPT1AP50416 773 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 CHMP4BP1P59074 171 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 SURF1Q15526 300 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 NOA1Q8NC60 698 aaKnown RBP9.57□□□□□ -0.88
TDP1-210ENST00000554976 HES6Q96HZ4 224 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 ALS2CR12Q96Q35 445 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 FNBP1Q96RU3 617 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 BCO2Q9BYV7 579 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 EPC1Q9H2F5 836 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 VRTNQ9H8Y1 702 aa9.57□□□□□ -0.88
TDP1-210ENST00000554976 OSGEPQ9NPF4 335 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms