RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 AKR1B10O60218 316 aa18.79■□□□□ 0.6
SHOX-204ENST00000554971 MGEA5O60502 916 aa18.79■□□□□ 0.6
SHOX-204ENST00000554971 ATP1A1P05023 1023 aaKnown RBP18.79■□□□□ 0.6
SHOX-204ENST00000554971 NMT1P30419 496 aaKnown RBP18.79■□□□□ 0.6
SHOX-204ENST00000554971 NFX1Q12986 1120 aaKnown RBP18.79■□□□□ 0.6
SHOX-204ENST00000554971 PAK2Q13177 524 aa18.79■□□□□ 0.6
SHOX-204ENST00000554971 ZNF365Q70YC5 407 aa18.79■□□□□ 0.6
SHOX-204ENST00000554971 ZNF572Q7Z3I7 529 aaPredicted RBP18.79■□□□□ 0.6
SHOX-204ENST00000554971 LINC01599Q8WXQ3 324 aa18.79■□□□□ 0.6
SHOX-204ENST00000554971 ALS2CR12Q96Q35 445 aa18.79■□□□□ 0.6
SHOX-204ENST00000554971 KCTD10Q9H3F6 313 aa18.79■□□□□ 0.6
SHOX-204ENST00000554971 KMT5AQ9NQR1 393 aa18.79■□□□□ 0.6
SHOX-204ENST00000554971 TRAF3IP3Q9Y228 551 aa18.79■□□□□ 0.6
SHOX-204ENST00000554971 INO80B-WBP1J3KQ70 363 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 CETN3O15182 167 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 B4GALT5O43286 388 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 HOXA11P31270 313 aaPredicted RBP18.78■□□□□ 0.6
SHOX-204ENST00000554971 CASP5P51878 434 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 ASTE1Q2TB18 679 aaPredicted RBP18.78■□□□□ 0.6
SHOX-204ENST00000554971 C9orf50Q5SZB4 431 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 RRAGAQ7L523 313 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 RTN4RL1Q86UN2 441 aaPredicted RBP18.78■□□□□ 0.6
SHOX-204ENST00000554971 PNKPQ96T60 521 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 INO80BQ9C086 356 aaPredicted RBP18.78■□□□□ 0.6
SHOX-204ENST00000554971 FZD8Q9H461 694 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 OLFML3Q9NRN5 406 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 TBC1D7Q9P0N9 293 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.78■□□□□ 0.6
SHOX-204ENST00000554971 RCCD1A6NED2 376 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 MAPTP10636 758 aaKnown RBP18.78■□□□□ 0.6
SHOX-204ENST00000554971 EIF4A3P38919 411 aaKnown RBP18.78■□□□□ 0.6
SHOX-204ENST00000554971 CCDC70Q6NSX1 233 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 OTOP2Q7RTS6 562 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 FRMD5Q7Z6J6 570 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 FAM178BQ8IXR5 827 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 RPUSD2Q8IZ73 545 aaKnown RBP18.78■□□□□ 0.6
SHOX-204ENST00000554971 DEPTORQ8TB45 409 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 SCFD1Q8WVM8 642 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 KCNN1Q92952 543 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 STRA6Q9BX79 667 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 PRO3102Q9H379 93 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 VIPAS39Q9H9C1 493 aa18.78■□□□□ 0.6
SHOX-204ENST00000554971 CXXC1Q9P0U4 656 aaPredicted RBP18.78■□□□□ 0.6
SHOX-204ENST00000554971 LRRC53A6NM62 1247 aa18.77■□□□□ 0.6
SHOX-204ENST00000554971 ZNF263O14978 683 aa18.77■□□□□ 0.6
SHOX-204ENST00000554971 TSPAN1O60635 241 aa18.77■□□□□ 0.6
SHOX-204ENST00000554971 PPP1R37O75864 691 aa18.77■□□□□ 0.6
SHOX-204ENST00000554971 SERPING1P05155 500 aa18.77■□□□□ 0.6
SHOX-204ENST00000554971 PFKMP08237 780 aa18.77■□□□□ 0.6
SHOX-204ENST00000554971 TCP1P17987 556 aaKnown RBP18.77■□□□□ 0.6
SHOX-204ENST00000554971 KCNMA1Q12791 1236 aa18.77■□□□□ 0.6
SHOX-204ENST00000554971 ZC2HC1CQ53FD0 456 aaPredicted RBP18.77■□□□□ 0.6
SHOX-204ENST00000554971 CNKSR3Q6P9H4 555 aa18.77■□□□□ 0.6
SHOX-204ENST00000554971 ZNF720Q7Z2F6 126 aa18.77■□□□□ 0.6
SHOX-204ENST00000554971 HAUS6Q7Z4H7 955 aa18.77■□□□□ 0.6
SHOX-204ENST00000554971 DENND3A2RUS2 1198 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 PDXKO00764 312 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 GPR182O15218 404 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 GAP43P17677 238 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 MAGEA1P43355 309 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 SMTNP53814 917 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 CYP27A1Q02318 531 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 SFMBT2Q5VUG0 894 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 TAF3Q5VWG9 929 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 CATSPER4Q7RTX7 472 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 SEPT8Q92599 483 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 C2orf40Q9H1Z8 148 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 RNF14Q9UBS8 474 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 SEL1LQ9UBV2 794 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 SNX12Q9UMY4 172 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 TRIP11Q15643 1979 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.76■□□□□ 0.59
SHOX-204ENST00000554971 K7ENM7 598 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 EPHB6O15197 1021 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 RHOXF2BP0C7M4 288 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 ARF4P18085 180 aaPredicted RBP18.76■□□□□ 0.59
SHOX-204ENST00000554971 EFNA5P52803 228 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 KCNA1Q09470 495 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 ADAM9Q13443 819 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 DSC3Q14574 896 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 FAM187BQ17R55 369 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 BMT2Q1RMZ1 405 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 ZBTB8OSQ8IWT0 167 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 NOA1Q8NC60 698 aaKnown RBP18.76■□□□□ 0.59
SHOX-204ENST00000554971 RHOXF2Q9BQY4 288 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 ABCB6Q9NP58 842 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 REV3LO60673 3130 aa18.76■□□□□ 0.59
SHOX-204ENST00000554971 GBF1Q92538 1859 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 K7ERI5 159 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 ENC1O14682 589 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 CALUO43852 315 aaPredicted RBP18.75■□□□□ 0.59
SHOX-204ENST00000554971 PRKCBP05771 671 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 RPL13P26373 211 aaKnown RBP18.75■□□□□ 0.59
SHOX-204ENST00000554971 ANXA13P27216 316 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 OAS2P29728 719 aaKnown RBP18.75■□□□□ 0.59
SHOX-204ENST00000554971 VSNL1P62760 191 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 GTF2BQ00403 316 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 MAPK6Q16659 721 aa18.75■□□□□ 0.59
SHOX-204ENST00000554971 KNOP1Q1ED39 458 aaKnown RBP18.75■□□□□ 0.59
SHOX-204ENST00000554971 C10orf76Q5T2E6 689 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms