RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CCDC92Q53HC0 331 aaPredicted RBP14.71□□□□□ -0.05
VTI1B-204ENST00000554659 MTHFD1LQ6UB35 978 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 LONP2Q86WA8 852 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 CATSPER3Q86XQ3 398 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 CHCHD3Q9NX63 227 aaKnown RBP14.71□□□□□ -0.05
VTI1B-204ENST00000554659 ZFATQ9P243 1243 aa14.71□□□□□ -0.05
VTI1B-204ENST00000554659 TRPC1P48995 793 aa14.71□□□□□ -0.06
VTI1B-204ENST00000554659 CORO7P57737 925 aa14.71□□□□□ -0.06
VTI1B-204ENST00000554659 GPSM2P81274 684 aa14.71□□□□□ -0.06
VTI1B-204ENST00000554659 OR2W6PQ8NHA6 318 aa14.71□□□□□ -0.06
VTI1B-204ENST00000554659 PAWRQ96IZ0 340 aaKnown RBP14.71□□□□□ -0.06
VTI1B-204ENST00000554659 ACAP3Q96P50 834 aa14.71□□□□□ -0.06
VTI1B-204ENST00000554659 ERP44Q9BS26 406 aa14.71□□□□□ -0.06
VTI1B-204ENST00000554659 COG4Q9H9E3 785 aa14.71□□□□□ -0.06
VTI1B-204ENST00000554659 FAM217BQ9NTX9 383 aaPredicted RBP14.71□□□□□ -0.06
VTI1B-204ENST00000554659 ZNF229Q9UJW7 825 aa14.71□□□□□ -0.06
VTI1B-204ENST00000554659 BNIP3LO60238 219 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 SUPT3HO75486 399 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 APOA1P02647 267 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 CSF1RP07333 972 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 CCDC159P0C7I6 412 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 SKOR1P84550 965 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 NBPF20Q3BBV1 942 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 TEX9Q8N6V9 391 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 MKNK1Q9BUB5 465 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 GGT7Q9UJ14 662 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 NEU2Q9Y3R4 380 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 SMAPO00193 183 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 EIF3DO15371 548 aaKnown RBP eCLIP14.7□□□□□ -0.06
VTI1B-204ENST00000554659 KCNA1Q09470 495 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 TBCCQ15814 346 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 WDR93Q6P2C0 686 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 C3orf20Q8ND61 904 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 IRAK4Q9NWZ3 460 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 EHD2Q9NZN4 543 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 HACD3Q9P035 362 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 DBR1Q9UK59 544 aaKnown RBP14.7□□□□□ -0.06
VTI1B-204ENST00000554659 CNTNAP5Q8WYK1 1306 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 CCT8L1PA6NM43 557 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 DAB1O75553 588 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 BLVRAP53004 296 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 IL25Q9H293 177 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 EML4Q9HC35 981 aaKnown RBP14.7□□□□□ -0.06
VTI1B-204ENST00000554659 SMARCAL1Q9NZC9 954 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 SERPINB9P50453 376 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 RBM43Q6ZSC3 357 aaKnown RBP14.7□□□□□ -0.06
VTI1B-204ENST00000554659 ARL8AQ96BM9 186 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 TNS3Q68CZ2 1445 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 ENO1P06733 434 aaKnown RBP14.7□□□□□ -0.06
VTI1B-204ENST00000554659 PYGLP06737 847 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 FXR2P51116 673 aaKnown RBP eCLIP14.7□□□□□ -0.06
VTI1B-204ENST00000554659 ALDH18A1P54886 795 aaKnown RBP14.7□□□□□ -0.06
VTI1B-204ENST00000554659 ACTR2P61160 394 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 FAM182BQ5T319 152 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 KCNB2Q92953 911 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 GFM2Q969S9 779 aaKnown RBP14.7□□□□□ -0.06
VTI1B-204ENST00000554659 EPB41L4AQ9HCS5 686 aaPredicted RBP14.7□□□□□ -0.06
VTI1B-204ENST00000554659 NPHS2Q9NP85 383 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 SLC8A2Q9UPR5 921 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 HPS5Q9UPZ3 1129 aa14.7□□□□□ -0.06
VTI1B-204ENST00000554659 AP3B1O00203 1094 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 SPAG6O75602 509 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 GNAT1P11488 350 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 ELF1P32519 619 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 ERFP50548 548 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 KLC1Q07866 573 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 CYTH1Q15438 398 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 LDHDQ86WU2 507 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 C18orf8Q96DM3 657 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 ACAD9Q9H845 621 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 ALG13Q9NP73 1137 aaKnown RBP14.69□□□□□ -0.06
VTI1B-204ENST00000554659 KIF17Q9P2E2 1029 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 IL10P22301 178 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 HADHAP40939 763 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 TSPY1Q01534 308 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 KDSRQ06136 332 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 PIGHQ14442 188 aaPredicted RBP14.69□□□□□ -0.06
VTI1B-204ENST00000554659 KDM7AQ6ZMT4 941 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 CYFIP1Q7L576 1253 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 OVOS2A0A0G2JMS6 1433 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 OVOS2A0A0J9YW53 1432 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 OVOS2Q6IE36 1432 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 TMEM120BA0PK00 339 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 P4HA2O15460 535 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 H2AFXP16104 143 aaPredicted RBP14.69□□□□□ -0.06
VTI1B-204ENST00000554659 IMPG1Q17R60 797 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 FASTKD1Q53R41 847 aaKnown RBP14.69□□□□□ -0.06
VTI1B-204ENST00000554659 PPP4R4Q6NUP7 873 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 ERP27Q96DN0 273 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 MTBPQ96DY7 904 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 SLC9A1P19634 815 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 CENPCQ03188 943 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 SLC10A5Q5PT55 438 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 SLC30A5Q8TAD4 765 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 ARHGEF26Q96DR7 871 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 THAP11Q96EK4 314 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 C9orf72Q96LT7 481 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 DNAJC7Q99615 494 aa14.69□□□□□ -0.06
VTI1B-204ENST00000554659 PTPRUQ92729 1446 aa14.68□□□□□ -0.06
VTI1B-204ENST00000554659 DLC1Q96QB1 1528 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms