RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 FANCCQ00597 558 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 TFDP1Q14186 410 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 TRIM25Q14258 630 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 AHCYL2Q96HN2 611 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 TNKS2Q9H2K2 1166 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 HOMER3Q9NSC5 361 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 HMGB2P26583 209 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 GRIK1P39086 918 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 USP4Q13107 963 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 AKAP4Q5JQC9 854 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 METTL21CQ5VZV1 264 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 DNAJC1Q96KC8 554 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 IDI2Q9BXS1 227 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 PANK4Q9NVE7 773 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 KIAA0232Q92628 1395 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 PITPNM2Q9BZ72 1349 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 CCL15-CCL14A0A0B4J2E2 113 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ACRP10323 421 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 DNAJA1P31689 397 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 CCL15Q16663 113 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 SDE2Q6IQ49 451 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ZBTB46Q86UZ6 589 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 TMEM39BQ9GZU3 492 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 L3MBTL1Q9Y468 752 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 SYNJ1O43426 1573 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 SREBF1P36956 1147 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 UHRF1Q96T88 793 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 PRRG4Q9BZD6 226 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 TCN1P20061 433 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 STIP1P31948 543 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 LRRC8EQ6NSJ5 796 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 DNAJC24Q6P3W2 148 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 NAF1Q96HR8 494 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ANKRD36BP1Q96IX9 119 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 BHLHE41Q9C0J9 482 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 GALNT8Q9NY28 637 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 CAMSAP2Q08AD1 1489 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ZNF407Q9C0G0 2248 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 DYTNA2CJ06 578 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 J3QRK9 145 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 GUCY1B2O75343 617 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 OR7A10O76100 309 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 CD2BP2O95400 341 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 TROVE2P10155 538 aaKnown RBP eCLIP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 LTKP29376 864 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 NMT1P30419 496 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 HMOX2P30519 316 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 SNU13P55769 128 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 DGKHQ86XP1 1220 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 PABPC5Q96DU9 382 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 DENND2AQ9ULE3 1009 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 F7P08709 466 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 SLC9A1P19634 815 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 NSFP46459 744 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 CPA2P48052 419 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 NRLP54845 237 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ARHGEF6Q15052 776 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 NFIL3Q16649 462 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 CYP4A22Q5TCH4 519 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 DHX36Q9H2U1 1008 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 SNX24Q9Y343 169 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 POLR2MP0CAP2 368 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 CRKP46108 304 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 RAPSNQ13702 412 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 LGSNQ5TDP6 509 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 C16orf87Q6PH81 154 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 DSELQ8IZU8 1212 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 GALNT4Q8N4A0 578 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ALLCQ8N6M5 410 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 RBBP8NLQ8NC74 664 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 FAM213AQ9BRX8 229 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ZNF577Q9BSK1 485 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 TEKT3Q9BXF9 490 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 SLC13A1Q9BZW2 595 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 PPP2R3BQ9Y5P8 575 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 MEI4A8MW99 385 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 NT5C1B-RDH14C9J2C7 533 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 DCLK1O15075 740 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 FOXN1O15353 648 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 INHBAP08476 426 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 CLTBP09497 229 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ZNF235Q14590 738 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 SLC10A5Q5PT55 438 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 RABGAP1LQ5R372 815 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 ARHGAP24Q8N264 748 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 GHDCQ8N2G8 530 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 PPM1NQ8N819 430 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 PNMA1Q8ND90 353 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 C17orf80Q9BSJ5 609 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 YIPF3Q9GZM5 350 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 AMFRQ9UKV5 643 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 NKTRP30414 1462 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 TMEM150BA6NC51 233 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 WTIPA6NIX2 430 aaPredicted RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 SGSM2O43147 1006 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 RASGRP1O95267 797 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 AFPP02771 609 aaKnown RBP3.48□□□□□ -1.85
SYNE2-212ENST00000554584 MIB1Q86YT6 1006 aa3.48□□□□□ -1.85
SYNE2-212ENST00000554584 PARP8Q8N3A8 854 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms