RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 SPTLC1O15269 473 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 MARCH6O60337 910 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 THP07101 528 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 TARSP26639 723 aaKnown RBP12.76□□□□□ -0.37
TUBB3-204ENST00000554116 KRT2P35908 639 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 RBM25P49756 843 aaKnown RBP12.76□□□□□ -0.37
TUBB3-204ENST00000554116 CREMQ03060 361 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 SOX4Q06945 474 aaPredicted RBP12.76□□□□□ -0.37
TUBB3-204ENST00000554116 ST3GAL1Q11201 340 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 TRIM29Q14134 588 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 CALCRLQ16602 461 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 ZNF528Q3MIS6 628 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 PPM1LQ5SGD2 360 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 NT5DC1Q5TFE4 455 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 CCDC83Q8IWF9 413 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 HACE1Q8IYU2 909 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 ZBTB44Q8NCP5 570 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 PPP1R10Q96QC0 940 aaKnown RBP12.76□□□□□ -0.37
TUBB3-204ENST00000554116 OSBPL6Q9BZF3 934 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 BRMS1Q9HCU9 246 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 LTB4R2Q9NPC1 389 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 PRMT7Q9NVM4 692 aaPredicted RBP12.76□□□□□ -0.37
TUBB3-204ENST00000554116 NCDNQ9UBB6 729 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 MTRRQ9UBK8 725 aa12.76□□□□□ -0.37
TUBB3-204ENST00000554116 CNOT1A5YKK6 2376 aaKnown RBP12.75□□□□□ -0.37
TUBB3-204ENST00000554116 TMEM189-UBE2V1I3L0A0 370 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 I3L4J1 428 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 ACKR2O00590 384 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 MEFVO15553 781 aaPredicted RBP12.75□□□□□ -0.37
TUBB3-204ENST00000554116 TBC1D4O60343 1298 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 LILRB5O75023 590 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 TDGF1P13385 188 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 FCARP24071 287 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 TKTP29401 623 aaKnown RBP12.75□□□□□ -0.37
TUBB3-204ENST00000554116 CLCNKBP51801 687 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 FOSBP53539 338 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 PRKCQQ04759 706 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 ECM1Q16610 540 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 TANGO2Q6ICL3 276 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 TSSK4Q6SA08 328 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 WDFY3Q8IZQ1 3526 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 ING5Q8WYH8 240 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 DDX27Q96GQ7 796 aaKnown RBP12.75□□□□□ -0.37
TUBB3-204ENST00000554116 ZSCAN31Q96LW9 406 aaPredicted RBP12.75□□□□□ -0.37
TUBB3-204ENST00000554116 GOLGA2P5Q9HBQ8 144 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 FBXO4Q9UKT5 387 aa12.75□□□□□ -0.37
TUBB3-204ENST00000554116 NCANO14594 1321 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 PRR5-ARHGAP8B1AHC4 643 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 NEMFO60524 1076 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 PRKCBP05771 671 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 CCR2P41597 374 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 BRCC3P46736 316 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 ARHGAP8P85298 464 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 LMNB2Q03252 620 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 UBXN2BQ14CS0 331 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 UPP1Q16831 310 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 UVSSAQ2YD98 709 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 GLRA4Q5JXX5 417 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 VARS2Q5ST30 1063 aaKnown RBP12.74□□□□□ -0.37
TUBB3-204ENST00000554116 LIN9Q5TKA1 542 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 ALKAL1Q6UXT8 129 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.74□□□□□ -0.37
TUBB3-204ENST00000554116 MTSS1LQ765P7 747 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 CEP120Q8N960 986 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 SECISBP2LQ93073 1101 aaKnown RBP12.74□□□□□ -0.37
TUBB3-204ENST00000554116 TCEAL4Q96EI5 215 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 MCRS1Q96EZ8 462 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 SHDQ96IW2 340 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 LLPHQ9BRT6 129 aaKnown RBP12.74□□□□□ -0.37
TUBB3-204ENST00000554116 KIFC3Q9BVG8 833 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 UPF2Q9HAU5 1272 aaKnown RBP12.74□□□□□ -0.37
TUBB3-204ENST00000554116 SPATA6Q9NWH7 488 aaPredicted RBP12.74□□□□□ -0.37
TUBB3-204ENST00000554116 KCNH3Q9ULD8 1083 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 POLIQ9UNA4 740 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 GDAQ9Y2T3 454 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 CDY1Q9Y6F8 540 aa12.74□□□□□ -0.37
TUBB3-204ENST00000554116 TICRRQ7Z2Z1 1910 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 N4BP3O15049 544 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 MOSPD3O75425 235 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 ABLIM3O94929 683 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 SEC24AO95486 1093 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 RHOP08100 348 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 CEBPBP17676 345 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 CYP11B2P19099 503 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 ATP2B1P20020 1258 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 CSTF1Q05048 431 aaKnown RBP12.73□□□□□ -0.37
TUBB3-204ENST00000554116 PRPF4BQ13523 1007 aaKnown RBP12.73□□□□□ -0.37
TUBB3-204ENST00000554116 PABPC1LQ4VXU2 614 aaKnown RBP12.73□□□□□ -0.37
TUBB3-204ENST00000554116 XKR4Q5GH76 650 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 PRSS36Q5K4E3 855 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 DIS3L2Q8IYB7 885 aaKnown RBP12.73□□□□□ -0.37
TUBB3-204ENST00000554116 TMEM130Q8N3G9 435 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 MCPH1Q8NEM0 835 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 ZMAT2Q96NC0 199 aaKnown RBP12.73□□□□□ -0.37
TUBB3-204ENST00000554116 POLR3CQ9BUI4 534 aaPredicted RBP12.73□□□□□ -0.37
TUBB3-204ENST00000554116 BCO2Q9BYV7 579 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 TUFT1Q9NNX1 390 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 PARD6AQ9NPB6 346 aa12.73□□□□□ -0.37
TUBB3-204ENST00000554116 AVENQ9NQS1 362 aaPredicted RBP12.73□□□□□ -0.37
TUBB3-204ENST00000554116 PRMT8Q9NR22 394 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms