RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 TGM1P22735 817 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 CA8P35219 290 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 GIT2Q14161 759 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 DSC3Q14574 896 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 PLCB4Q15147 1175 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 SLC35G1Q2M3R5 365 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 LETM2Q2VYF4 491 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 ZNF528Q3MIS6 628 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 MTHFD1LQ6UB35 978 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 PLPPR4Q7Z2D5 763 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 ZNF438Q7Z4V0 828 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 ZNF589Q86UQ0 364 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-224ENST00000554040 PPFIBP1Q86W92 1011 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 HOMER1Q86YM7 354 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 KIAA0319LQ8IZA0 1049 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 VPS52Q8N1B4 723 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 TRAPPC12Q8WVT3 735 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 TMEM40Q8WWA1 233 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 RSAD2Q8WXG1 361 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 EDEM1Q92611 657 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 SECISBP2LQ93073 1101 aaKnown RBP7.83□□□□□ -1.16
ATXN3-224ENST00000554040 NXPE3Q969Y0 559 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 EVI5LQ96CN4 794 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 GPRASP2Q96D09 838 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 FAM227BQ96M60 508 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 HHIPQ96QV1 700 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 PIGSQ96S52 555 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 AZI2Q9H6S1 392 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 RIOX1Q9H6W3 641 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 SFXN1Q9H9B4 322 aa7.83□□□□□ -1.16
ATXN3-224ENST00000554040 KIAA1671Q9BY89 1806 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 A0A0D9SFI3 127 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 PNMA6FA0A0J9YX94 578 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 NT5C1B-RDH14C9J2C7 533 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 N4BP1O75113 896 aaKnown RBP7.82□□□□□ -1.16
ATXN3-224ENST00000554040 IGLV1-40P01703 118 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 PDGFAP04085 211 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 CTSAP10619 480 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 SRFP11831 508 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 ITGB5P18084 799 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 MX1P20591 662 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 KLRC1P26715 233 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 SSTR4P31391 388 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 ALDH7A1P49419 539 aaKnown RBP7.82□□□□□ -1.16
ATXN3-224ENST00000554040 C15orf39Q6ZRI6 1047 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 FAM228AQ86W67 206 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 TICAM2Q86XR7 235 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 ABI1Q8IZP0 508 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 ATRIPQ8WXE1 791 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 AUTS2Q8WXX7 1259 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 ZBP1Q9H171 429 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 EPS15L1Q9UBC2 864 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 FBXO4Q9UKT5 387 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 PCDHGA2Q9Y5H1 932 aa7.82□□□□□ -1.16
ATXN3-224ENST00000554040 B4E1Z4 1266 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 MEIS2O14770 477 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 MAFGO15525 162 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 CYTH3O43739 400 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 METAP2P50579 478 aaKnown RBP eCLIP7.81□□□□□ -1.16
ATXN3-224ENST00000554040 STAT5BP51692 787 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 CRYBB1P53674 252 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-224ENST00000554040 POLGP54098 1239 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-224ENST00000554040 BCAR1P56945 870 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 ACAP1Q15027 740 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 PPM1JQ5JR12 505 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 CLLU1OSQ5K130 101 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 IFIT1BQ5T764 474 aaKnown RBP7.81□□□□□ -1.16
ATXN3-224ENST00000554040 DCLRE1AQ6PJP8 1040 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 USP17L6PQ6QN14 398 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 DDX53Q86TM3 631 aaKnown RBP7.81□□□□□ -1.16
ATXN3-224ENST00000554040 ECHDC2Q86YB7 292 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 KRTAP1-3Q8IUG1 177 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 ZDHHC13Q8IUH4 622 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 PJA1Q8NG27 643 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 TMEM169Q96HH4 297 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 EPC1Q9H2F5 836 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 WDR6Q9NNW5 1121 aaKnown RBP7.81□□□□□ -1.16
ATXN3-224ENST00000554040 ARHGEF3Q9NR81 526 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 STOML1Q9UBI4 398 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 USP18Q9UMW8 372 aa7.81□□□□□ -1.16
ATXN3-224ENST00000554040 FNDC1Q4ZHG4 1894 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-224ENST00000554040 BAZ2BQ9UIF8 2168 aaKnown RBP7.8□□□□□ -1.16
ATXN3-224ENST00000554040 CEP295Q9C0D2 2601 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 KIAA1324LA8MWY0 1029 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-224ENST00000554040 H3BRJ5 948 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 SLC30A4O14863 429 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 LAMTOR5O43504 91 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 TBC1D4O60343 1298 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 HBP1O60381 514 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 GPR32O75388 356 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 TGFB1P01137 390 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 ZSCAN20P17040 1043 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-224ENST00000554040 MPSTP25325 297 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 GBP2P32456 591 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-224ENST00000554040 SLC26A2P50443 739 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 CLCN4P51793 760 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 STARD6P59095 220 aa7.8□□□□□ -1.16
ATXN3-224ENST00000554040 CSTF1Q05048 431 aaKnown RBP7.8□□□□□ -1.16
ATXN3-224ENST00000554040 DNM1Q05193 864 aaKnown RBP7.8□□□□□ -1.16
ATXN3-224ENST00000554040 NMIQ13287 307 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms