RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 PTPRHQ9HD43 1115 aa9.94□□□□□ -0.82
SDR39U1-207ENST00000553937 WDR6Q9NNW5 1121 aaKnown RBP9.94□□□□□ -0.82
SDR39U1-207ENST00000553937 ZDHHC7Q9NXF8 308 aa9.94□□□□□ -0.82
SDR39U1-207ENST00000553937 FBXO2Q9UK22 296 aaPredicted RBP9.94□□□□□ -0.82
SDR39U1-207ENST00000553937 CACNA1HO95180 2353 aa9.94□□□□□ -0.82
SDR39U1-207ENST00000553937 USP34Q70CQ2 3546 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 SMIM28A0A1B0GU29 152 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 TMEM189-UBE2V1I3L0A0 370 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 ABLIM1O14639 778 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 ADAM12O43184 909 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 ZMYND10O75800 440 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 PAPLNO95428 1278 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 HARSP12081 509 aaKnown RBP9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 PROZP22891 400 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 GUCY2CP25092 1073 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 MRE11P49959 708 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 YARSP54577 528 aaKnown RBP9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 PTPN5P54829 565 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 SLC12A3P55017 1021 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 CACNB1Q02641 598 aaPredicted RBP9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 SOX4Q06945 474 aaPredicted RBP9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 TCF15Q12870 199 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 ELAVL2Q12926 359 aaKnown RBP9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 TDGQ13569 410 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 UPP1Q16831 310 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 ARL6IP4Q66PJ3 421 aaKnown RBP9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 SYT2Q8N9I0 419 aaPredicted RBP9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 C3orf58Q8NDZ4 430 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 LRRC15Q8TF66 581 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 STAMQ92783 540 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 CDK5RAP3Q96JB5 506 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 UROC1Q96N76 676 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 ZNF396Q96N95 335 aaPredicted RBP9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 MYADMQ96S97 322 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 PHOX2BQ99453 314 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 PRRX2Q99811 253 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 TIPINQ9BVW5 301 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 PRKD2Q9BZL6 878 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 C17orf75Q9HAS0 396 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 KCNK12Q9HB15 430 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 GDPD2Q9HCC8 539 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 TOPORSQ9NS56 1045 aaPredicted RBP9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 FBXW11Q9UKB1 542 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 PATJQ8NI35 1801 aa9.93□□□□□ -0.82
SDR39U1-207ENST00000553937 MYO15AQ9UKN7 3530 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 NPHP3-ACAD11A0A0J9YXS1 232 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 I3L4J1 428 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 B3GAT3O94766 335 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 C8AP07357 584 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 PLA2G4BP0C869 781 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 MCF2P10911 925 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 PLS3P13797 630 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 FGFR3P22607 806 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 DDIT3P35638 169 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 BRCC3P46736 316 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 STRN3Q13033 797 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 DHX8Q14562 1220 aaKnown RBP9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 SLC39A14Q15043 492 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 KARSQ15046 597 aaKnown RBP9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 TMEM119Q4V9L6 283 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 XKR4Q5GH76 650 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 LIN9Q5TKA1 542 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 PDXDC1Q6P996 788 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 DCLRE1AQ6PJP8 1040 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 MPZL3Q6UWV2 235 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 CD300LGQ6UXG3 332 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 ALKAL1Q6UXT8 129 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 GET4Q7L5D6 327 aaPredicted RBP9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 KCTD17Q8N5Z5 321 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 TMEM105Q8N8V8 129 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 LINC00301Q8NCQ3 95 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 SPIRE2Q8WWL2 714 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 RSAD2Q8WXG1 361 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 ZBTB45Q96K62 511 aaPredicted RBP9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 SNX27Q96L92 541 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 ZMAT2Q96NC0 199 aaKnown RBP9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 NTPCRQ9BSD7 190 aaKnown RBP9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 TCHPQ9BT92 498 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 IGSF9Q9P2J2 1179 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 ANKFY1Q9P2R3 1169 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 MTRRQ9UBK8 725 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 DUSP12Q9UNI6 340 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 COL4A3Q01955 1670 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 SCN1AP35498 2009 aa9.92□□□□□ -0.82
SDR39U1-207ENST00000553937 PODXLO00592 558 aa9.91□□□□□ -0.82
SDR39U1-207ENST00000553937 SPTLC2O15270 562 aa9.91□□□□□ -0.82
SDR39U1-207ENST00000553937 MEFVO15553 781 aaPredicted RBP9.91□□□□□ -0.82
SDR39U1-207ENST00000553937 NARSO43776 548 aaKnown RBP9.91□□□□□ -0.82
SDR39U1-207ENST00000553937 BMP15O95972 392 aa9.91□□□□□ -0.82
SDR39U1-207ENST00000553937 MAPTP10636 758 aaKnown RBP9.91□□□□□ -0.82
SDR39U1-207ENST00000553937 TKTP29401 623 aaKnown RBP9.91□□□□□ -0.82
SDR39U1-207ENST00000553937 OR1D2P34982 312 aa9.91□□□□□ -0.82
SDR39U1-207ENST00000553937 NASPP49321 788 aaPredicted RBP9.91□□□□□ -0.82
SDR39U1-207ENST00000553937 SMTNP53814 917 aa9.91□□□□□ -0.82
SDR39U1-207ENST00000553937 SEZ6Q53EL9 994 aa9.91□□□□□ -0.82
SDR39U1-207ENST00000553937 ARSHQ5FYA8 562 aa9.91□□□□□ -0.82
SDR39U1-207ENST00000553937 PPM1LQ5SGD2 360 aa9.91□□□□□ -0.82
SDR39U1-207ENST00000553937 CWF19L1Q69YN2 538 aaKnown RBP9.91□□□□□ -0.82
SDR39U1-207ENST00000553937 RSPO2Q6UXX9 243 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms